RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ZNF555Q8NEP9 628 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TMEM138Q9NPI0 162 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 RPRD1BQ9NQG5 326 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 HMGCRP04035 888 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 PAX7P23759 505 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 ITPKBP27987 946 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 SPATA21Q7Z572 469 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 FAM111AQ96PZ2 611 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TTTY10Q9BZA0 68 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 MROH8Q9H579 483 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 FER1L6Q2WGJ9 1857 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 PHF3Q92576 2039 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 A8MUI8 341 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 EIF1AYO14602 144 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 KCNJ13O60928 360 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 NCAM1P13591 858 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TDGQ13569 410 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 C2orf27AQ580R0 203 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D19Q8N5T2 526 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TSPAN14Q8NG11 270 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CASP10Q92851 521 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CGRRF1Q99675 332 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 THUMPD3Q9BV44 507 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 SLC4A5Q9BY07 1137 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 WDCPQ9H6R7 721 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 IARS2Q9NSE4 1012 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 DAPK2Q9UIK4 370 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 KDM2BQ8NHM5 1336 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 A0A0U1RQJ8 604 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 EEF2KO00418 725 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 HAUS5O94927 633 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 IGFBP1P08833 259 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CCNCP24863 283 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CHAF1BQ13112 559 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 SQLEQ14534 574 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 PUS10Q3MIT2 529 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 BNC2Q6ZN30 1099 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 NUDT18Q6ZVK8 323 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 HELQQ8TDG4 1101 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 MSLNLQ96KJ4 702 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CEP295NLQ96MC4 621 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 DDX47Q9H0S4 455 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CD84Q9UIB8 345 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 C16orf96A6NNT2 1141 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 ARHGEF33A8MVX0 844 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 PIP5K1CO60331 668 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 FAM20BO75063 409 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 OXCT1P55809 520 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CYP4F8P98187 520 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 GTF2H2Q13888 395 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 GTF2H2CQ6P1K8 395 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 KIRREL3Q8IZU9 778 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 FATE1Q969F0 183 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 DHTKD1Q96HY7 919 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 GJD4Q96KN9 370 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 FEM1AQ9BSK4 669 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 WRAP53Q9BUR4 548 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3DA0A087WVF3 549 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3IA0A087WXS9 549 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3EA0A087X179 549 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3KA0A087X1G2 549 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3FA6NER0 549 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3LB9A6J9 549 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 NKRFO15226 690 aaKnown RBP eCLIP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 KCNN4O15554 427 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3HP0C7X1 549 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TMEM31Q5JXX7 168 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3GQ6DHY5 549 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3CQ6IPX1 549 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CTU1Q7Z7A3 348 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF598Q86UK7 904 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CFAP206Q8IYR0 622 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3Q8IZP1 549 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 PRMT6Q96LA8 375 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TARS2Q9BW92 718 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 ACTR5Q9H9F9 607 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 NKIRAS2Q9NYR9 191 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 MRPS23Q9Y3D9 190 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 ABHD14A-ACY1A0A1B0GW23 586 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 DHX15O43143 795 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 GNA14O95837 355 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 FMO4P31512 558 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 PTPN9P43378 593 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 ARFIP2P53365 341 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF200P98182 395 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 HIST2H2ACQ16777 129 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 HIST2H2AA3Q6FI13 130 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CEP97Q8IW35 865 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 DENND6AQ8IWF6 608 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 CEP95Q96GE4 821 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 SMG9Q9H0W8 520 aaKnown RBP3.39□□□□□ -1.87
SYNE2-212ENST00000554584 KIF24Q5T7B8 1368 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D3BA6NDS4 549 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 RFXAPO00287 272 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 KRT8P05787 483 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 NOS3P29474 1203 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 STAT5BP51692 787 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 PHF19Q5T6S3 580 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 TMC5Q6UXY8 1006 aa3.39□□□□□ -1.87
SYNE2-212ENST00000554584 NLRP10Q86W26 655 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms