RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 HPS6Q86YV9 775 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 PPP1R14BQ96C90 147 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 GMLQ99445 158 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 SMYD2Q9NRG4 433 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 SIRPGQ9P1W8 387 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 APPL1Q9UKG1 709 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 H3BNX3 289 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 ZNF646O15015 1829 aaPredicted RBP17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 DENRO43583 198 aaKnown RBP17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 PEX1O43933 1283 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 DNAJA2O60884 412 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 ASS1P00966 412 aaKnown RBP17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 SLC5A2P31639 672 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 ALDH1A3P47895 512 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 CDH6P55285 790 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 COG7P83436 770 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 BSPRYQ5W0U4 402 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 TRIM67Q6ZTA4 783 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 RNF168Q8IYW5 571 aaPredicted RBP17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 ZBTB8BQ8NAP8 495 aaPredicted RBP17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 TTC13Q8NBP0 860 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 HSPBAP1Q96EW2 488 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 ZNF302Q9NR11 478 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 MAGED2Q9UNF1 606 aaPredicted RBP17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 SSX2IPQ9Y2D8 614 aa17.49■□□□□ 0.39
PPP4R3A-202ENST00000554390 PLA2G6O60733 806 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 COPAP53621 1224 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 CXCL9Q07325 125 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 TMEM132BQ14DG7 1078 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 MPP5Q8N3R9 675 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 DCUN1D1Q96GG9 259 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 NLRP4Q96MN2 994 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 OGFRL1Q5TC84 451 aaPredicted RBP17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 IYDQ6PHW0 289 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 TRIM72Q6ZMU5 477 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 TSHZ1Q6ZSZ6 1077 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 POLNQ7Z5Q5 900 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 RNF149Q8NC42 400 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 MOCOSQ96EN8 888 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 ZFRQ96KR1 1074 aaKnown RBP17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 MRPS26Q9BYN8 205 aaKnown RBP17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 CEP41Q9BYV8 373 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 SH3GLB1Q9Y371 365 aa17.48■□□□□ 0.39
PPP4R3A-202ENST00000554390 BPTFQ12830 3046 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 ARHGAP10A1A4S6 786 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 KCNN4O15554 427 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 CALB1P05937 261 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 CLDN10P78369 228 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 GK3PQ14409 553 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 PPP6R3Q5H9R7 873 aaPredicted RBP17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 TTC39BQ5VTQ0 682 aaPredicted RBP17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 KLHL35Q6PF15 583 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 MAML3Q96JK9 1138 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 CNBD2Q96M20 576 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 PRPF18Q99633 342 aaKnown RBP17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 MRPL1Q9BYD6 325 aaKnown RBP17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 ARHGEF38Q9NXL2 777 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 SF3B1O75533 1304 aaKnown RBP eCLIP17.47■□□□□ 0.395e-6■■■■■ 64.6
PPP4R3A-202ENST00000554390 TRMUO75648 421 aaKnown RBP17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 ZMPSTE24O75844 475 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 ATP5BP06576 529 aaKnown RBP17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 CDK18Q07002 472 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 WASHC5Q12768 1159 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 XKR3Q5GH77 459 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 FAM102AQ5T9C2 384 aaPredicted RBP17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 STYK1Q6J9G0 422 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 LRRC8BQ6P9F7 803 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 ACTRT2Q8TDY3 377 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 VCPIP1Q96JH7 1222 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 LPIN3Q9BQK8 851 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 SDCBP2Q9H190 292 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 PORCNQ9H237 461 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 SORCS3Q9UPU3 1222 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 TDRKHQ9Y2W6 561 aaKnown RBP17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 AFG3L2Q9Y4W6 797 aa17.47■□□□□ 0.39
PPP4R3A-202ENST00000554390 TMEM221A6NGB7 291 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 H3BSA7 217 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 SNNO75324 88 aaPredicted RBP17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 SUPT20HL2P0C7V6 817 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 CXCL8P10145 99 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 TBXAS1P24557 533 aaPredicted RBP17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 MCCD1P59942 119 aaPredicted RBP17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 MYBPC1Q00872 1141 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 PPIDQ08752 370 aaKnown RBP17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 MTA1Q13330 715 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 PIGHQ14442 188 aaPredicted RBP17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 CNGA3Q16281 694 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 SUPT20HL1Q3ZLR7 823 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 EEF1DP3Q658K8 133 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 TRNP1Q6NT89 227 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 RSPH3Q86UC2 560 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 SLC26A11Q86WA9 606 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 DEFB107AQ8IZN7 70 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 AGR3Q8TD06 166 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 NSUN6Q8TEA1 469 aaKnown RBP17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 DEFB129Q9H1M3 183 aa17.46■□□□□ 0.39
PPP4R3A-202ENST00000554390 OATP04181 439 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms