RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SEMG2Q02383 582 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 CCDC178Q5BJE1 867 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 PRR31Q5SQ13 230 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 CYP4A22Q5TCH4 519 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 SWSAP1Q6NVH7 229 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 PDXDC1Q6P996 788 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 LPCAT2Q7L5N7 544 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 NT5DC4Q86YG4 428 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 SYT12Q8IV01 421 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 CCDC60Q8IWA6 550 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-226ENST00000554350 TEX2Q8IWB9 1127 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 TRIM59Q8IWR1 403 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 USP33Q8TEY7 942 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 HASPINQ8TF76 798 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 ZFYVE19Q96K21 471 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 ZSWIM3Q96MP5 696 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 TMEM209Q96SK2 561 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 GAD1Q99259 594 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 CLSTN3Q9BQT9 956 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 TTPALQ9BTX7 342 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 SSBP3Q9BWW4 388 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-226ENST00000554350 TMPRSS5Q9H3S3 457 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 MARCH2Q9P0N8 246 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 ADAM28Q9UKQ2 775 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 ADAMTS9Q9P2N4 1935 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 SF3B1O75533 1304 aaKnown RBP eCLIP6.23□□□□□ -1.414e-12■■■■■ 275.7
ATXN3-226ENST00000554350 TTC41PQ6P2S7 1318 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 CNTNAP2Q9UHC6 1331 aa6.23□□□□□ -1.41
ATXN3-226ENST00000554350 PTPRBP23467 1997 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 GON4LQ3T8J9 2241 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 GOLGA6L22H0YM25 854 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 PRRG1O14668 218 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 CHADO15335 359 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 FOXP2O15409 715 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 ADAM12O43184 909 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 SMARCA5O60264 1052 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-226ENST00000554350 POU2F2P09086 479 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 MYL4P12829 197 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 GJA1P17302 382 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 RPL13P26373 211 aaKnown RBP6.22□□□□□ -1.41
ATXN3-226ENST00000554350 ELF1P32519 619 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 OR1D2P34982 312 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 SCNN1GP51170 649 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 DMC1Q14565 340 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 FAM171A1Q5VUB5 890 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 LYSMD4Q5XG99 296 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 GTF2IRD2BQ6EKJ0 949 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 MIS18BP1Q6P0N0 1132 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 GTF2IRD2Q86UP8 949 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 DCP2Q8IU60 420 aaKnown RBP6.22□□□□□ -1.41
ATXN3-226ENST00000554350 Q8N1Y9 231 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 ELMOD1Q8N336 334 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 GALNT15Q8N3T1 639 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 BVESQ8NE79 360 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 TSTD1Q8NFU3 115 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 RPLP0P6Q8NHW5 317 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 SETD7Q8WTS6 366 aaKnown RBP6.22□□□□□ -1.41
ATXN3-226ENST00000554350 KCNH7Q9NS40 1196 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 TMEM74BQ9NUR3 256 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 SNTG2Q9NY99 539 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 UBIAD1Q9Y5Z9 338 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 TSC2P49815 1807 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 PI4KAP42356 2102 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 COL12A1Q99715 3063 aa6.22□□□□□ -1.41
ATXN3-226ENST00000554350 BAZ2BQ9UIF8 2168 aaKnown RBP6.21□□□□□ -1.41
ATXN3-226ENST00000554350 MUC22E2RYF6 1773 aaPredicted RBP6.21□□□□□ -1.41
ATXN3-226ENST00000554350 UBR5O95071 2799 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-226ENST00000554350 ITPR3Q14573 2671 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 A0A087WZ62 844 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 ARL5CA6NH57 179 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 PLK4O00444 970 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 MAFGO15525 162 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 TBX1O43435 398 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 ZNF623O75123 536 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 EGFP01133 1207 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 HSP90AA1P07900 732 aaKnown RBP6.21□□□□□ -1.42
ATXN3-226ENST00000554350 MYF5P13349 255 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 TNFRSF1AP19438 455 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 CHMLP26374 656 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 MLH1P40692 756 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 PTGER3P43115 390 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 ITGA1P56199 1179 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 RHDQ02161 417 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 CCDC173Q0VFZ6 552 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 CUL4AQ13619 759 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 PTPAQ15257 358 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 DUOXA1Q1HG43 343 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 PREPLQ4J6C6 727 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-226ENST00000554350 ANO7Q6IWH7 933 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 FSTL4Q6MZW2 842 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 ETV3LQ6ZN32 361 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 STK32CQ86UX6 486 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 TBC1D10CQ8IV04 446 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 CCDC103Q8IW40 242 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 GPR65Q8IYL9 337 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 ENAHQ8N8S7 591 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-226ENST00000554350 KYQ8NBH2 561 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 RLN3Q8WXF3 142 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 E2F7Q96AV8 911 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 NXPE2Q96DL1 559 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms