RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RING1Q06587 406 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 KCNMA1Q12791 1236 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 C2orf27AQ580R0 203 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 C10orf76Q5T2E6 689 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 HEATR6Q6AI08 1181 aaKnown RBP13.63□□□□□ -0.23
SHMT2-211ENST00000554310 TMEM110Q86TL2 294 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 DENND1CQ8IV53 801 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 NAT16Q8N8M0 369 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 KCNV2Q8TDN2 545 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 CLEC4CQ8WTT0 213 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 RUBCNQ92622 972 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 SERPINB11Q96P15 392 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 NOX5Q96PH1 765 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 NAA15Q9BXJ9 866 aaKnown RBP13.63□□□□□ -0.23
SHMT2-211ENST00000554310 PLCB1Q9NQ66 1216 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 SFMBT1Q9UHJ3 866 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 CYTH4Q9UIA0 394 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 STOML2Q9UJZ1 356 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 RAB23Q9ULC3 237 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 MMP17Q9ULZ9 603 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 DAAM1Q9Y4D1 1078 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 CEP83Q9Y592 693 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 FHOD1Q9Y613 1164 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 MYO18AQ92614 2054 aaKnown RBP13.63□□□□□ -0.23
SHMT2-211ENST00000554310 EML5Q05BV3 1969 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 TBC1D3BA6NDS4 549 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 PAPSS1O43252 624 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-211ENST00000554310 IGLV3-27P01718 113 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 NCAM1P13591 858 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 KRT9P35527 623 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 DGKGP49619 791 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 ZNF75DP51815 510 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 NNTQ13423 1086 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 DRAP1Q14919 205 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-211ENST00000554310 FYB2Q5VWT5 728 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 NUGGCQ68CJ6 796 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 TRMT11Q7Z4G4 463 aaKnown RBP13.62□□□□□ -0.23
SHMT2-211ENST00000554310 SLC47A2Q86VL8 602 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 SFTPA1Q8IWL2 248 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 SCUBE3Q8IX30 993 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 IL17RCQ8NAC3 791 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 TSTD1Q8NFU3 115 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 DQX1Q8TE96 717 aaKnown RBP13.62□□□□□ -0.23
SHMT2-211ENST00000554310 FAM149B1Q96BN6 582 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 HHIPQ96QV1 700 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 HINFPQ9BQA5 517 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 VPS16Q9H269 839 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 LHX5Q9H2C1 402 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
SHMT2-211ENST00000554310 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.62□□□□□ -0.23
SHMT2-211ENST00000554310 LIMA1Q9UHB6 759 aaKnown RBP13.62□□□□□ -0.23
SHMT2-211ENST00000554310 STARD13Q9Y3M8 1113 aa13.62□□□□□ -0.23
SHMT2-211ENST00000554310 SMTNL1A8MU46 457 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 LGALS16A8MUM7 142 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 F8VZ95 297 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 AXIN1O15169 862 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 ZNF500O60304 480 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-211ENST00000554310 PNMA6AP0CW24 399 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-211ENST00000554310 ZNF18P17022 549 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 DGKEP52429 567 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 COPB1P53618 953 aaKnown RBP13.61□□□□□ -0.23
SHMT2-211ENST00000554310 TBX4P57082 545 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 SNX16P57768 344 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 SIM2Q14190 667 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-211ENST00000554310 CRY1Q16526 586 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 EOGTQ5NDL2 527 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 LAIR1Q6GTX8 287 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 PASD1Q8IV76 773 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 UNC45BQ8IWX7 931 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 CCDC33Q8N5R6 958 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 ALLCQ8N6M5 410 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 ZNF513Q8N8E2 541 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-211ENST00000554310 C1orf131Q8NDD1 294 aaKnown RBP13.61□□□□□ -0.23
SHMT2-211ENST00000554310 IPO4Q8TEX9 1081 aaKnown RBP13.61□□□□□ -0.23
SHMT2-211ENST00000554310 GAB3Q8WWW8 586 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 BHMTQ93088 406 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 PPP1R13BQ96KQ4 1090 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 STK33Q9BYT3 514 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 IRX2Q9BZI1 471 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-211ENST00000554310 GANQ9H2C0 597 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 POPDC2Q9HBU9 364 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 ASNSD1Q9NWL6 643 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 NCDNQ9UBB6 729 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 EBF1Q9UH73 591 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 GMEB2Q9UKD1 530 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 SLC27A6Q9Y2P4 619 aa13.61□□□□□ -0.23
SHMT2-211ENST00000554310 CAPN9O14815 690 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 TRIM24O15164 1050 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 HRO43593 1189 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 RPP40O75818 363 aaKnown RBP13.6□□□□□ -0.23
SHMT2-211ENST00000554310 KLF8O95600 359 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-211ENST00000554310 FYNP06241 537 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 GLI1P08151 1106 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 CISD3P0C7P0 127 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 CYP11B1P15538 503 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 TIE1P35590 1138 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 PXNP49023 591 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-211ENST00000554310 SLC11A2P49281 568 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 YWHAZP63104 245 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms