RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 TLR6Q9Y2C9 796 aa24.23■■□□□ 1.47
NEK9-203ENST00000553945 KIAA1549LQ6ZVL6 1849 aa24.23■■□□□ 1.47
NEK9-203ENST00000553945 LRRC53A6NM62 1247 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 RNF40O75150 1001 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 TULP3O75386 442 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 APODP05090 189 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 PITX1P78337 314 aaPredicted RBP24.22■■□□□ 1.47
NEK9-203ENST00000553945 CDK17Q00537 523 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 RING1Q06587 406 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 ASIC2Q16515 512 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 FBXO43Q4G163 708 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 IRF2BP2Q7Z5L9 587 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 XYLT1Q86Y38 959 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 MAML2Q8IZL2 1156 aaPredicted RBP24.22■■□□□ 1.47
NEK9-203ENST00000553945 CPXM2Q8N436 756 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 SPEM1Q8N4L4 309 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 SLC30A5Q8TAD4 765 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 ATOH1Q92858 354 aaPredicted RBP24.22■■□□□ 1.47
NEK9-203ENST00000553945 FCRL2Q96LA5 508 aaPredicted RBP24.22■■□□□ 1.47
NEK9-203ENST00000553945 XPO6Q96QU8 1125 aaKnown RBP24.22■■□□□ 1.47
NEK9-203ENST00000553945 PCDHB18PQ96TA0 734 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 EDEM3Q9BZQ6 932 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 FAM204AQ9H8W3 233 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 DNAJC17Q9NVM6 304 aaKnown RBP24.22■■□□□ 1.47
NEK9-203ENST00000553945 PLK2Q9NYY3 685 aa24.22■■□□□ 1.47
NEK9-203ENST00000553945 MUC6Q6W4X9 2439 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 GOLGA8SH3BPF8 625 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 DAB1O75553 588 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 KAT7O95251 611 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 LATS1O95835 1130 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 TRUB2O95900 331 aaKnown RBP24.21■■□□□ 1.47
NEK9-203ENST00000553945 CYBBP04839 570 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 PBX1P40424 430 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 SLC11A2P49281 568 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 CCR3P51677 355 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 RNASE9P60153 205 aaKnown RBP24.21■■□□□ 1.47
NEK9-203ENST00000553945 CSTF1Q05048 431 aaKnown RBP24.21■■□□□ 1.47
NEK9-203ENST00000553945 MESP2Q0VG99 397 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 NNTQ13423 1086 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 FAM102AQ5T9C2 384 aaPredicted RBP24.21■■□□□ 1.47
NEK9-203ENST00000553945 MMS22LQ6ZRQ5 1243 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 FAM217AQ8IXS0 508 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 ZNF397Q8NF99 534 aaPredicted RBP24.21■■□□□ 1.47
NEK9-203ENST00000553945 NUP58Q9BVL2 599 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 TTYH3Q9C0H2 523 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 FAM86C1Q9NVL1 165 aa24.21■■□□□ 1.47
NEK9-203ENST00000553945 SYNJ2BP-COX16A0A087WUM0 186 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 K7EQS6 105 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 CACNG3O60359 315 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 TSPAN3O60637 253 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 CXCL12P48061 93 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 SEC13P55735 322 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 ZNF445P59923 1031 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 SATB1Q01826 763 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 NHLH1Q02575 133 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 CLEC16AQ2KHT3 1053 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 PREPLQ4J6C6 727 aaPredicted RBP24.2■■□□□ 1.46
NEK9-203ENST00000553945 FIGNQ5HY92 759 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 ADGRF1Q5T601 910 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 SFMBT2Q5VUG0 894 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 GRAMD4Q6IC98 578 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 PKN3Q6P5Z2 889 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 TSSK4Q6SA08 328 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 SFTPA1Q8IWL2 248 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 DDI1Q8WTU0 396 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 SLC39A13Q96H72 371 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 XPO4Q9C0E2 1151 aaKnown RBP24.2■■□□□ 1.46
NEK9-203ENST00000553945 DDIT4Q9NX09 232 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 COX16Q9P0S2 106 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 FBXO4Q9UKT5 387 aa24.2■■□□□ 1.46
NEK9-203ENST00000553945 TRIM24O15164 1050 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 IRAK2O43187 625 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 ACSL4O60488 711 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 MOCS2O96007 188 aaPredicted RBP24.19■■□□□ 1.46
NEK9-203ENST00000553945 IGLV3-25P01717 112 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 TPM3P06753 285 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 SP9P0CG40 484 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 UNGP13051 313 aaPredicted RBP24.19■■□□□ 1.46
NEK9-203ENST00000553945 MMP8P22894 467 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 NOS2P35228 1153 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 SCNN1AP37088 669 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 GRIA2P42262 883 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 NSFP46459 744 aaKnown RBP24.19■■□□□ 1.46
NEK9-203ENST00000553945 ZC3H12AQ5D1E8 599 aaKnown RBP24.19■■□□□ 1.46
NEK9-203ENST00000553945 FYB2Q5VWT5 728 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 MAMSTRQ6ZN01 415 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 PHTF2Q8N3S3 785 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 RPLP0P6Q8NHW5 317 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 P2RY11Q96G91 374 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 C11orf70Q9BRQ4 267 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 PRMT8Q9NR22 394 aaPredicted RBP24.19■■□□□ 1.46
NEK9-203ENST00000553945 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.19■■□□□ 1.46
NEK9-203ENST00000553945 STOML2Q9UJZ1 356 aa24.19■■□□□ 1.46
NEK9-203ENST00000553945 GOLGA6L7A0A1B0GV03 622 aa24.18■■□□□ 1.46
NEK9-203ENST00000553945 TBC1D3BA6NDS4 549 aa24.18■■□□□ 1.46
NEK9-203ENST00000553945 ATG13O75143 517 aa24.18■■□□□ 1.46
NEK9-203ENST00000553945 PENKP01210 267 aaPredicted RBP24.18■■□□□ 1.46
NEK9-203ENST00000553945 APOEP02649 317 aa24.18■■□□□ 1.46
NEK9-203ENST00000553945 TNFAIP3P21580 790 aa24.18■■□□□ 1.46
NEK9-203ENST00000553945 GBP1P32455 592 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms