RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CNTN6Q9UQ52 1028 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 CCL26Q9Y258 94 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 ZNF510Q9Y2H8 683 aa8.74□□□□□ -1.01
PSEN1-209ENST00000553855 SERTM1A2A2V5 107 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 SPECC1L-ADORA2AF8WAN1 911 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 FOXN3O00409 490 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-209ENST00000553855 CAPN9O14815 690 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 OLFM2O95897 454 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 UCHL3P15374 230 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 STAT1P42224 750 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 POLR2FP61218 127 aaKnown RBP8.73□□□□□ -1.01
PSEN1-209ENST00000553855 EFEMP1Q12805 493 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 CLN3Q13286 438 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 DRAP1Q14919 205 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-209ENST00000553855 TEAD4Q15561 434 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 PKDCCQ504Y2 493 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 RAB41Q5JT25 222 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 DGKKQ5KSL6 1271 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 MIB1Q86YT6 1006 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 PJA1Q8NG27 643 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 SLC35F5Q8WV83 523 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 TFAP2BQ92481 460 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 FAM149B1Q96BN6 582 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 SLC22A12Q96S37 553 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 FAM129BQ96TA1 746 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 IER2Q9BTL4 223 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 STK33Q9BYT3 514 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 RNF38Q9H0F5 515 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 ECT2Q9H8V3 914 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 ABCC13Q9NSE7 274 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 FAM207AQ9NSI2 230 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-209ENST00000553855 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.73□□□□□ -1.01
PSEN1-209ENST00000553855 GTSE1Q9NYZ3 720 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 WNT6Q9Y6F9 365 aa8.73□□□□□ -1.01
PSEN1-209ENST00000553855 PIEZO1Q92508 2521 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 SLC12A8A0AV02 714 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 LRRC10BA6NIK2 292 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-209ENST00000553855 TULP2O00295 520 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 LAMTOR5O43504 91 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 CYBBP04839 570 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 DCNP07585 359 aaKnown RBP8.72□□□□□ -1.01
PSEN1-209ENST00000553855 CD72P21854 359 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 HARS2P49590 506 aaKnown RBP8.72□□□□□ -1.01
PSEN1-209ENST00000553855 VCPP55072 806 aaKnown RBP8.72□□□□□ -1.01
PSEN1-209ENST00000553855 GAD2Q05329 585 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 TNK2Q07912 1038 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 KCNMA1Q12791 1236 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 NNTQ13423 1086 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 ZSCAN23Q3MJ62 389 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 BSPRYQ5W0U4 402 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 CWF19L1Q69YN2 538 aaKnown RBP8.72□□□□□ -1.01
PSEN1-209ENST00000553855 TRIM68Q6AZZ1 485 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 PM20D1Q6GTS8 502 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 DENND1BQ6P3S1 775 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 FAM71AQ8IYT1 594 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 SCML4Q8N228 414 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 ZNF276Q8N554 614 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 KDF1Q8NAX2 398 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-209ENST00000553855 DTWD2Q8NBA8 298 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 TMEM35BQ8NCS4 154 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 LRRC3BQ96PB8 259 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 FAM83CQ9BQN1 747 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 DDX23Q9BUQ8 820 aaKnown RBP8.72□□□□□ -1.01
PSEN1-209ENST00000553855 FOXQ1Q9C009 403 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 NMUR1Q9HB89 426 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 SIX2Q9NPC8 291 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 NLRC4Q9NPP4 1024 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 SPATA6Q9NWH7 488 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-209ENST00000553855 MARCH2Q9P0N8 246 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 FHOD1Q9Y613 1164 aa8.72□□□□□ -1.01
PSEN1-209ENST00000553855 NOTCH4Q99466 2003 aa8.71□□□□□ -1.01
PSEN1-209ENST00000553855 DOCK8Q8NF50 2099 aa8.71□□□□□ -1.01
PSEN1-209ENST00000553855 FAM187AA6NFU0 413 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 PIK3R2O00459 728 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 ATG13O75143 517 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 TBX18O95935 607 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 LTFP02788 710 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 HMBSP08397 361 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 ADH5P11766 374 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 ARSAP15289 507 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 ZNF18P17022 549 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 DRD1P21728 446 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 TARSP26639 723 aaKnown RBP8.71□□□□□ -1.02
PSEN1-209ENST00000553855 NOS2P35228 1153 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 CHKAP35790 457 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 GPD2P43304 727 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 RPS9P46781 194 aaKnown RBP8.71□□□□□ -1.02
PSEN1-209ENST00000553855 SOX9P48436 509 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 DAOAP59103 153 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 APBA1Q02410 837 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 NCAPHQ15003 741 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 PON2Q15165 354 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 ANO4Q32M45 955 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 FBXO43Q4G163 708 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 PMF1Q6P1K2 205 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 TOGARAM2Q6ZUX3 1019 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 HTR3DQ70Z44 454 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 SCD5Q86SK9 330 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 ZNF677Q86XU0 584 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms