RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ZNF132P52740 706 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 AP3M2P53677 418 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 AMPD3Q01432 767 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 CAMK2BQ13554 666 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 STK38Q15208 465 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 KNOP1Q1ED39 458 aaKnown RBP9.54□□□□□ -0.88
SYNE2-209ENST00000553308 ZACNQ401N2 412 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 CCDC157Q569K6 752 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 TMEM215Q68D42 235 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 SERPINA13PQ6UXR4 307 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 UNC93AQ86WB7 457 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 LINC00301Q8NCQ3 95 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 PIWIL1Q96J94 861 aaKnown RBP9.54□□□□□ -0.88
SYNE2-209ENST00000553308 HNRNPABQ99729 332 aaKnown RBP9.54□□□□□ -0.88
SYNE2-209ENST00000553308 NUP58Q9BVL2 599 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 CIPCQ9C0C6 399 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 ELOVL2Q9NXB9 296 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 CGNQ9P2M7 1197 aaKnown RBP9.54□□□□□ -0.88
SYNE2-209ENST00000553308 MTMR6Q9Y217 621 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 SNX11Q9Y5W9 270 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 MUC22E2RYF6 1773 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-209ENST00000553308 ACACAQ13085 2346 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 A0A087WV48 116 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 KCNK3O14649 394 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 SPTLC2O15270 562 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 STX6O43752 255 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 KIF20AO95235 890 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 ASS1P00966 412 aaKnown RBP9.53□□□□□ -0.88
SYNE2-209ENST00000553308 PRB1P04280 392 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 RALAP11233 206 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 ACSL1P33121 698 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 CHKAP35790 457 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 PIK3CAP42336 1068 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 AFF3P51826 1226 aaKnown RBP9.53□□□□□ -0.88
SYNE2-209ENST00000553308 IL9RQ01113 521 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 INCA1Q0VD86 236 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 EFEMP1Q12805 493 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 EIF4HQ15056 248 aaKnown RBP9.53□□□□□ -0.88
SYNE2-209ENST00000553308 PTPRNQ16849 979 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 SGSM1Q2NKQ1 1148 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 KCNT1Q5JUK3 1230 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 SHC4Q6S5L8 630 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 CCDC186Q7Z3E2 898 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 DENND1CQ8IV53 801 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 GALNT15Q8N3T1 639 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 ZNF366Q8N895 744 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 IQUBQ8NA54 791 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 ADAM32Q8TC27 787 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 CYFIP2Q96F07 1278 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 DCBLD2Q96PD2 775 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 LHX5Q9H2C1 402 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 TM9SF3Q9HD45 589 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 PNPLA8Q9NP80 782 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 AGO1Q9UL18 857 aaKnown RBP9.53□□□□□ -0.88
SYNE2-209ENST00000553308 ZNF510Q9Y2H8 683 aa9.53□□□□□ -0.88
SYNE2-209ENST00000553308 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.53□□□□□ -0.88
SYNE2-209ENST00000553308 LOC400499M0QZD8 3231 aa9.52□□□□□ -0.88
SYNE2-209ENST00000553308 NUMA1Q14980 2115 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 H0Y8X5 98 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 TNFSF14O43557 240 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 PPP6R2O75170 966 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 HLA-DRAP01903 254 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 CYBBP04839 570 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 RPN1P04843 607 aaKnown RBP9.52□□□□□ -0.89
SYNE2-209ENST00000553308 GRK6P43250 576 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 AFMP43652 599 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 GRIA4P48058 902 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 PSEN1P49768 467 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 CCT8P50990 548 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 COG7P83436 770 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 CAMK2GQ13555 558 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-209ENST00000553308 CUL4BQ13620 913 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 SUZ12Q15022 739 aaKnown RBP9.52□□□□□ -0.89
SYNE2-209ENST00000553308 TEAD4Q15561 434 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 SMAD1Q15797 465 aaKnown RBP9.52□□□□□ -0.89
SYNE2-209ENST00000553308 C1orf220Q5T0J3 134 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 DHRS13Q6UX07 377 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 SV2AQ7L0J3 742 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 TADA2BQ86TJ2 420 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 SCUBE3Q8IX30 993 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 GRAMD1CQ8IYS0 662 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 CPXM2Q8N436 756 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 ZNF276Q8N554 614 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 OR2T3Q8NH03 318 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 DDI1Q8WTU0 396 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 CYB5D2Q8WUJ1 264 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 TAF4BQ92750 862 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 IGSF8Q969P0 613 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 BIRC7Q96CA5 298 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 NT5C1AQ9BXI3 368 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 PCED1AQ9H1Q7 454 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 UPF2Q9HAU5 1272 aaKnown RBP9.52□□□□□ -0.89
SYNE2-209ENST00000553308 APOBEC3GQ9HC16 384 aaKnown RBP9.52□□□□□ -0.89
SYNE2-209ENST00000553308 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 DMAC2Q9NW81 257 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 CLIC5Q9NZA1 410 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 ANKRD6Q9Y2G4 727 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 USP3Q9Y6I4 520 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 IGSF10Q6WRI0 2623 aa9.52□□□□□ -0.89
SYNE2-209ENST00000553308 URB1O60287 2271 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms