RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 MYOFQ9NZM1 2061 aa12.02□□□□□ -0.49
NEK3-204ENST00000552973 TRIM49BA6NDI0 452 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 PIK3R2O00459 728 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 ARHGAP33O14559 1287 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 HYAL3O43820 417 aaPredicted RBP12.01□□□□□ -0.49
NEK3-204ENST00000552973 SYNCRIPO60506 623 aaKnown RBP12.01□□□□□ -0.49
NEK3-204ENST00000552973 ZBED1O96006 694 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 CYBBP04839 570 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 CD6P30203 668 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 SLC8A3P57103 927 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 MCCD1P59942 119 aaPredicted RBP12.01□□□□□ -0.49
NEK3-204ENST00000552973 SIM1P81133 766 aaPredicted RBP12.01□□□□□ -0.49
NEK3-204ENST00000552973 SEMA3BQ13214 749 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 CUL2Q13617 745 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 ZNF234Q14588 700 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 PLEKHG6Q3KR16 790 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 ISM2Q6H9L7 571 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 TMPRSS6Q8IU80 811 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 FMNL3Q8IVF7 1028 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 UCMAQ8WVF2 138 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 EDEM1Q92611 657 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 TOE1Q96GM8 510 aaKnown RBP12.01□□□□□ -0.49
NEK3-204ENST00000552973 PIWIL1Q96J94 861 aaKnown RBP12.01□□□□□ -0.49
NEK3-204ENST00000552973 CAMK1GQ96NX5 476 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 TSG101Q99816 390 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 GPR174Q9BXC1 333 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 ADAM33Q9BZ11 813 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 MIR1-1HGQ9H1L0 117 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 ELOVL2Q9NXB9 296 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 ZMIZ1Q9ULJ6 1067 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 THADAQ6YHU6 1953 aa12.01□□□□□ -0.49
NEK3-204ENST00000552973 KCNJ18B7U540 433 aa12□□□□□ -0.49
NEK3-204ENST00000552973 XPO1O14980 1071 aaKnown RBP12□□□□□ -0.49
NEK3-204ENST00000552973 SYPP08247 313 aa12□□□□□ -0.49
NEK3-204ENST00000552973 HLA-EP13747 358 aa12□□□□□ -0.49
NEK3-204ENST00000552973 LCP1P13796 627 aa12□□□□□ -0.49
NEK3-204ENST00000552973 PRKCHP24723 683 aa12□□□□□ -0.49
NEK3-204ENST00000552973 HOXD12P35452 270 aa12□□□□□ -0.49
NEK3-204ENST00000552973 RGS7P49802 495 aa12□□□□□ -0.49
NEK3-204ENST00000552973 ADIGQ0VDE8 80 aa12□□□□□ -0.49
NEK3-204ENST00000552973 SGO2Q562F6 1265 aa12□□□□□ -0.49
NEK3-204ENST00000552973 SYCP2LQ5T4T6 812 aa12□□□□□ -0.49
NEK3-204ENST00000552973 ZNF658Q5TYW1 1059 aaPredicted RBP12□□□□□ -0.49
NEK3-204ENST00000552973 BSPRYQ5W0U4 402 aa12□□□□□ -0.49
NEK3-204ENST00000552973 TMEM215Q68D42 235 aa12□□□□□ -0.49
NEK3-204ENST00000552973 PM20D1Q6GTS8 502 aa12□□□□□ -0.49
NEK3-204ENST00000552973 BHLHA9Q7RTU4 235 aa12□□□□□ -0.49
NEK3-204ENST00000552973 ANKS1BQ7Z6G8 1248 aa12□□□□□ -0.49
NEK3-204ENST00000552973 PIP4P1Q86T03 277 aa12□□□□□ -0.49
NEK3-204ENST00000552973 CPXM2Q8N436 756 aa12□□□□□ -0.49
NEK3-204ENST00000552973 SIPA1Q96FS4 1042 aa12□□□□□ -0.49
NEK3-204ENST00000552973 CCDC34Q96HJ3 373 aa12□□□□□ -0.49
NEK3-204ENST00000552973 FAXDC2Q96IV6 333 aa12□□□□□ -0.49
NEK3-204ENST00000552973 IPO9Q96P70 1041 aaKnown RBP12□□□□□ -0.49
NEK3-204ENST00000552973 ITM2CQ9NQX7 267 aa12□□□□□ -0.49
NEK3-204ENST00000552973 RMND1Q9NWS8 449 aa12□□□□□ -0.49
NEK3-204ENST00000552973 WSB2Q9NYS7 404 aaPredicted RBP12□□□□□ -0.49
NEK3-204ENST00000552973 HESX1Q9UBX0 185 aa12□□□□□ -0.49
NEK3-204ENST00000552973 SPAG17Q6Q759 2223 aa12□□□□□ -0.49
NEK3-204ENST00000552973 YJEFN3A6XGL0 299 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 MEI4A8MW99 385 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 E7ENQ6 273 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 MSI1O43347 362 aaKnown RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 SH3BP5O60239 455 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 CALCAP01258 141 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 EPHX1P07099 455 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 VDRP11473 427 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 NCAM1P13591 858 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 CD59P13987 128 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 GNSP15586 552 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 HARS2P49590 506 aaKnown RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 TPMTP51580 245 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 BCAT1P54687 386 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 FKBP3Q00688 224 aaKnown RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 ARID5AQ03989 594 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 TRIP4Q15650 581 aaPredicted RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 MPPE1Q53F39 396 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 WDR45BQ5MNZ6 344 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 RABEPKQ7Z6M1 372 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 FAM124AQ86V42 546 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 FMR1NBQ8N0W7 255 aaPredicted RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 SIX6OS1Q8N1H7 587 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 ZCCHC9Q8N567 271 aaKnown RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 ZNF366Q8N895 744 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 RNF139Q8WU17 664 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 CYB5D2Q8WUJ1 264 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 PRCCQ92733 491 aaPredicted RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 FOXJ1Q92949 421 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 PLD4Q96BZ4 506 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 TMEM121BQ9BXQ6 578 aaPredicted RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 FAM124BQ9H5Z6 455 aaPredicted RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 ARMCX3Q9UH62 379 aaPredicted RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 KLK13Q9UKR3 277 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 COQ4Q9Y3A0 265 aa11.99□□□□□ -0.49
NEK3-204ENST00000552973 TPRP12270 2363 aaKnown RBP11.99□□□□□ -0.49
NEK3-204ENST00000552973 GOLGA6L7A0A1B0GV03 622 aa11.98□□□□□ -0.49
NEK3-204ENST00000552973 GOLGA6L4A6NEF3 574 aa11.98□□□□□ -0.49
NEK3-204ENST00000552973 SLC16A3O15427 465 aaKnown RBP11.98□□□□□ -0.49
NEK3-204ENST00000552973 ACADMP11310 421 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms