RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 SNX19Q92543 992 aa17.15■□□□□ 0.34
RAB5C-209ENST00000552162 PIWIL1Q96J94 861 aaKnown RBP17.15■□□□□ 0.34
RAB5C-209ENST00000552162 LRIG1Q96JA1 1093 aa17.15■□□□□ 0.34
RAB5C-209ENST00000552162 TWNKQ96RR1 684 aa17.15■□□□□ 0.34
RAB5C-209ENST00000552162 CDC6Q99741 560 aa17.15■□□□□ 0.34
RAB5C-209ENST00000552162 NUP58Q9BVL2 599 aa17.15■□□□□ 0.34
RAB5C-209ENST00000552162 DKK4Q9UBT3 224 aa17.15■□□□□ 0.34
RAB5C-209ENST00000552162 RASAL2Q9UJF2 1139 aa17.15■□□□□ 0.34
RAB5C-209ENST00000552162 PCDHGB2Q9Y5G2 931 aa17.15■□□□□ 0.34
RAB5C-209ENST00000552162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.14■□□□□ 0.33
RAB5C-209ENST00000552162 A0A1B0GVT2 93 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 PVALEFA0A1B0GWK0 134 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 CUTAO60888 179 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 DKK1O94907 266 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 EPHX1P07099 455 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 HMBSP08397 361 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 RALAP11233 206 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 PRKCHP24723 683 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 CORO1AP31146 461 aaKnown RBP17.14■□□□□ 0.33
RAB5C-209ENST00000552162 PIK3CAP42336 1068 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 INCA1Q0VD86 236 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 EIF4HQ15056 248 aaKnown RBP17.14■□□□□ 0.33
RAB5C-209ENST00000552162 DBX2Q6ZNG2 339 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 FAM124AQ86V42 546 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 ZNF276Q8N554 614 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 C1orf216Q8TAB5 229 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 RHBDD1Q8TEB9 315 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 CYFIP2Q96F07 1278 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 BBC3Q96PG8 261 aaPredicted RBP17.14■□□□□ 0.33
RAB5C-209ENST00000552162 CDK5RAP1Q96SZ6 601 aaKnown RBP17.14■□□□□ 0.33
RAB5C-209ENST00000552162 CIPCQ9C0C6 399 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 ELOVL2Q9NXB9 296 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 CLIC5Q9NZA1 410 aa17.14■□□□□ 0.33
RAB5C-209ENST00000552162 GOLGA8CPA6NN73 597 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 POLR2DO15514 142 aaKnown RBP17.13■□□□□ 0.33
RAB5C-209ENST00000552162 CSNK1EP49674 416 aaKnown RBP17.13■□□□□ 0.33
RAB5C-209ENST00000552162 AFF3P51826 1226 aaKnown RBP17.13■□□□□ 0.33
RAB5C-209ENST00000552162 COG7P83436 770 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 EFEMP1Q12805 493 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 CUL4BQ13620 913 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 NUMA1Q14980 2115 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 E2F5Q15329 346 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 SERPINA13PQ6UXR4 307 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 SV2AQ7L0J3 742 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 MARCH9Q86YJ5 346 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 GALNT15Q8N3T1 639 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 RBBP8NLQ8NC74 664 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-209ENST00000552162 SORCS1Q8WY21 1168 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 NT5C1AQ9BXI3 368 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 BACH2Q9BYV9 841 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 DCLK3Q9C098 648 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 PCED1AQ9H1Q7 454 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 DMAC2Q9NW81 257 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 AGO1Q9UL18 857 aaKnown RBP17.13■□□□□ 0.33
RAB5C-209ENST00000552162 CLEC4EQ9ULY5 219 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 BTBD3Q9Y2F9 522 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 SLCO1B1Q9Y6L6 691 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 BPTFQ12830 3046 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 URB1O60287 2271 aaKnown RBP17.13■□□□□ 0.33
RAB5C-209ENST00000552162 KNL1Q8NG31 2342 aa17.13■□□□□ 0.33
RAB5C-209ENST00000552162 MUC22E2RYF6 1773 aaPredicted RBP17.12■□□□□ 0.33
RAB5C-209ENST00000552162 GOLGA4Q13439 2230 aaKnown RBP17.12■□□□□ 0.33
RAB5C-209ENST00000552162 CABIN1Q9Y6J0 2220 aa17.12■□□□□ 0.33
RAB5C-209ENST00000552162 KIF20AO95235 890 aa17.12■□□□□ 0.33
RAB5C-209ENST00000552162 YEATS4O95619 227 aa17.12■□□□□ 0.33
RAB5C-209ENST00000552162 HLA-DRAP01903 254 aa17.12■□□□□ 0.33
RAB5C-209ENST00000552162 CYBBP04839 570 aa17.12■□□□□ 0.33
RAB5C-209ENST00000552162 AFMP43652 599 aa17.12■□□□□ 0.33
RAB5C-209ENST00000552162 DENND1CQ8IV53 801 aa17.12■□□□□ 0.33
RAB5C-209ENST00000552162 SLC9A9Q8IVB4 645 aa17.12■□□□□ 0.33
RAB5C-209ENST00000552162 TMC2Q8TDI7 906 aa17.12■□□□□ 0.33
RAB5C-209ENST00000552162 ZNF396Q96N95 335 aaPredicted RBP17.12■□□□□ 0.33
RAB5C-209ENST00000552162 USP3Q9Y6I4 520 aa17.12■□□□□ 0.33
RAB5C-209ENST00000552162 SETXQ7Z333 2677 aaKnown RBP17.12■□□□□ 0.33
RAB5C-209ENST00000552162 EIF4E1BA6NMX2 242 aaKnown RBP17.11■□□□□ 0.33
RAB5C-209ENST00000552162 NR3C1P04150 777 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 CD58P19256 250 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 ARID5AQ03989 594 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 CYP4F3Q08477 520 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 SUZ12Q15022 739 aaKnown RBP17.11■□□□□ 0.33
RAB5C-209ENST00000552162 KIF19Q2TAC6 998 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 TMEM215Q68D42 235 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 GRAMD1CQ8IYS0 662 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 CPXM2Q8N436 756 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 KIAA0895Q8NCT3 520 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 OR2T3Q8NH03 318 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 DDI1Q8WTU0 396 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 TMEM174Q8WUU8 243 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
RAB5C-209ENST00000552162 DUSP16Q9BY84 665 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 IMPG2Q9BZV3 1241 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 LHX5Q9H2C1 402 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 C6orf106Q9H6K1 298 aaPredicted RBP17.11■□□□□ 0.33
RAB5C-209ENST00000552162 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.11■□□□□ 0.33
RAB5C-209ENST00000552162 SNX11Q9Y5W9 270 aa17.11■□□□□ 0.33
RAB5C-209ENST00000552162 TP53BP1Q12888 1972 aaPredicted RBP17.11■□□□□ 0.33
RAB5C-209ENST00000552162 FAM149AA5PLN7 773 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 TRABD2BA6NFA1 517 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 IKBKBO14920 756 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms