RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ANO7Q6IWH7 933 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 MTHFD1LQ6UB35 978 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-219ENST00000551544 TRIM42Q8IWZ5 723 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 LMNTD2Q8IXW0 634 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 LINC01465Q8N7H1 131 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 DTX3LQ8TDB6 740 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 WDR60Q8WVS4 1066 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 LRRC39Q96DD0 335 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 ZMAT2Q96NC0 199 aaKnown RBP13.48□□□□□ -0.25
CACNB3-219ENST00000551544 SLC17A6Q9P2U8 582 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 TUBGCP4Q9UGJ1 667 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 AP4E1Q9UPM8 1137 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 HES2Q9Y543 173 aa13.48□□□□□ -0.25
CACNB3-219ENST00000551544 A8MXQ7 604 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 B2RBV5 119 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 DDNO94850 711 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-219ENST00000551544 PDHA1P08559 390 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 CCDC130P13994 396 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 AMPD1P23109 780 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 AQP5P55064 265 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 KIZQ2M2Z5 673 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 MUM1Q2TAK8 710 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 HEATR6Q6AI08 1181 aaKnown RBP13.47□□□□□ -0.25
CACNB3-219ENST00000551544 CCDC185Q8N715 623 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 C18orf25Q96B23 403 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-219ENST00000551544 C7orf26Q96N11 449 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 C20orf27Q9GZN8 174 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 KCNK4Q9NYG8 393 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 PAPPA2Q9BXP8 1791 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 EME2A4GXA9 379 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-219ENST00000551544 FAM159BA6NKW6 160 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 H3BRJ5 948 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 GCATO75600 419 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 STAU1O95793 577 aaKnown RBP13.47□□□□□ -0.25
CACNB3-219ENST00000551544 IL1BP01584 269 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 RARBP10826 455 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 PGM1P36871 562 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 CCNFP41002 786 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 LBRQ14739 615 aaKnown RBP13.47□□□□□ -0.25
CACNB3-219ENST00000551544 NBPF20Q3BBV1 942 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 BSPRYQ5W0U4 402 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 TREML1Q86YW5 311 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 PYROXD2Q8N2H3 581 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 PDCD7Q8N8D1 485 aaKnown RBP13.47□□□□□ -0.25
CACNB3-219ENST00000551544 SMC1BQ8NDV3 1235 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 DNAJC9Q8WXX5 260 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 USP6NLQ92738 828 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 MTBPQ96DY7 904 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 KCTD15Q96SI1 283 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-219ENST00000551544 SIRPGQ9P1W8 387 aa13.47□□□□□ -0.25
CACNB3-219ENST00000551544 TRIP11Q15643 1979 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 WDR27A2RRH5 827 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 ASB14A6NK59 587 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 CXCL11O14625 94 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 ACADSP16219 412 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 MAGEA3P43357 314 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 ERFP50548 548 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 ALDH18A1P54886 795 aaKnown RBP13.46□□□□□ -0.25
CACNB3-219ENST00000551544 OCRLQ01968 901 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 KDSRQ06136 332 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 DPYSL2Q16555 572 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 SOWAHAQ2M3V2 549 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 TSNAXIP1Q2TAA8 658 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 CRLF3Q8IUI8 442 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.46□□□□□ -0.25
CACNB3-219ENST00000551544 STKLD1Q8NE28 680 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 FBXO27Q8NI29 283 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 PPP1R14CQ8TAE6 165 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 RILPQ96NA2 401 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 CSPG4P5Q96PW8 444 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 APOL6Q9BWW8 343 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 YIPF3Q9GZM5 350 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 ARHGEF4Q9NR80 690 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 STOML1Q9UBI4 398 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 PCDHA11Q9Y5I1 949 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 SCN1AP35498 2009 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 SETSIPP0DME0 302 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 GOT1P17174 413 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 ADORA2AP29274 412 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 GRM5P41594 1212 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 TEX44Q53QW1 395 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 C16orf46Q6P387 395 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 NLGN2Q8NFZ4 835 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 PPP1R13LQ8WUF5 828 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 STMN2Q93045 179 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 LGMNQ99538 433 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 CEP41Q9BYV8 373 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 MROH8Q9H579 483 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 MTMR10Q9NXD2 777 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 DTLQ9NZJ0 730 aa13.46□□□□□ -0.25
CACNB3-219ENST00000551544 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.46□□□□□ -0.25
CACNB3-219ENST00000551544 DPPA5A6NC42 116 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 H3BRB1 525 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 CAPN9O14815 690 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 NVLO15381 856 aaKnown RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 UPP2O95045 317 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 BPGMP07738 259 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 GSTA2P09210 222 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 CYP2C8P10632 490 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms