RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CCNE1P24864 410 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 ITGB8P26012 769 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 EPHA5P54756 1037 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 CCL23P55773 120 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 FAM189BP81408 668 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 FKBP3Q00688 224 aaKnown RBP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 ENPEPQ07075 957 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 NOLC1Q14978 699 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 PSRC1Q6PGN9 363 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 SLC24A5Q71RS6 500 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 HACE1Q8IYU2 909 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 NOC3LQ8WTT2 800 aaKnown RBP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 SREK1Q8WXA9 508 aaKnown RBP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 P2RX5Q93086 422 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 BICD1Q96G01 975 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 TSPAN18Q96SJ8 248 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 TSG101Q99816 390 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 ADPGKQ9BRR6 497 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 TCHPQ9BT92 498 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 FUCA2Q9BTY2 467 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 TARS2Q9BW92 718 aaKnown RBP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 CD244Q9BZW8 370 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 TMX1Q9H3N1 280 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 PDZD7Q9H5P4 517 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 UBN1Q9NPG3 1134 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 RGS18Q9NS28 235 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 DMAC2Q9NW81 257 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 PIN4Q9Y237 131 aaKnown RBP6.22□□□□□ -1.41
SCAF11-213ENST00000550629 MYRFQ9Y2G1 1151 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 PCDHA9Q9Y5H5 950 aa6.22□□□□□ -1.41
SCAF11-213ENST00000550629 MROH6A6NGR9 719 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 IKBKBO14920 756 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 MAPK13O15264 365 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 OGTO15294 1046 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 SLC16A3O15427 465 aaKnown RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 EXTL3O43909 919 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 FAM189A1O60320 539 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 CSDE1O75534 798 aaKnown RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 CRTAMO95727 393 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 NR3C1P04150 777 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 CLTAP09496 248 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ADSSP30520 456 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ZNF568Q3ZCX4 644 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ZC3H12BQ5HYM0 836 aaKnown RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 PHF19Q5T6S3 580 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 SPATA1Q5VX52 437 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 VASNQ6EMK4 673 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ISM2Q6H9L7 571 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 TWF2Q6IBS0 349 aaKnown RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 TTI2Q6NXR4 508 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 SLC39A4Q6P5W5 647 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 LRSAM1Q6UWE0 723 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 MRPL10Q7Z7H8 261 aaKnown RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 NELFCDQ8IXH7 590 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ZC3H3Q8IXZ2 948 aaKnown RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 DTX3Q8N9I9 347 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 XXYLT1Q8NBI6 393 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 DBF4BQ8NFT6 615 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 NELFBQ8WX92 580 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ZCCHC14Q8WYQ9 949 aaKnown RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 POMGNT1Q8WZA1 660 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 BADQ92934 168 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 FBXW5Q969U6 566 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 PGBD4Q96DM1 585 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 SCLYQ96I15 445 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ZNF668Q96K58 619 aaPredicted RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ADAM2Q99965 735 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 MSTO1Q9BUK6 570 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 TRIM6Q9C030 488 aaPredicted RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 CDT1Q9H211 546 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 MTIF3Q9H2K0 278 aaKnown RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ELAC1Q9H777 363 aaKnown RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 L2HGDHQ9H9P8 463 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 PLEKHA5Q9HAU0 1116 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 TOPORSQ9NS56 1045 aaPredicted RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 CATSPERZQ9NTU4 200 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ANKFY1Q9P2R3 1169 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 AGO2Q9UKV8 859 aaKnown RBP6.21□□□□□ -1.42
SCAF11-213ENST00000550629 PCDHB2Q9Y5E7 798 aa6.21□□□□□ -1.42
SCAF11-213ENST00000550629 ANKRD63C9JTQ0 380 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 ACOT7O00154 380 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 ENPP3O14638 875 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 CETN3O15182 167 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 INPPL1O15357 1258 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 IL18RAPO95256 599 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 GNA14O95837 355 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 FGBP02675 491 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 AMHP03971 560 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 EDN1P05305 212 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 CKMP06732 381 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 ADRB2P07550 413 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 STAG3L1P0CL83 205 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 PYGMP11217 842 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 FGFR4P22455 802 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 NR2F2P24468 414 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 PSMC2P35998 433 aaKnown RBP6.2□□□□□ -1.42
SCAF11-213ENST00000550629 MYL5Q02045 173 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 SNRNP35Q16560 246 aaKnown RBP6.2□□□□□ -1.42
SCAF11-213ENST00000550629 ANO6Q4KMQ2 910 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 CD276Q5ZPR3 534 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms