RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 ZMPSTE24O75844 475 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 PDE5AO76074 875 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 SORBS2O94875 1100 aaKnown RBP12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 BPGMP07738 259 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 GNAT1P11488 350 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 INSRRP14616 1297 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 ARF4P18085 180 aaPredicted RBP12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 NCF2P19878 526 aaPredicted RBP12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 GRIK3Q13003 919 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 VGLL4Q14135 290 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 ZNF772Q68DY9 489 aaPredicted RBP12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 TTC30AQ86WT1 665 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 ADGRF2Q8IZF7 708 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 PHC3Q8NDX5 983 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 ZNF483Q8TF39 744 aaPredicted RBP12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 PYDC1Q8WXC3 89 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 SIGLEC10Q96LC7 697 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 EBNA1BP2Q99848 306 aaKnown RBP12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 ACSS2Q9NR19 701 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 HESX1Q9UBX0 185 aa12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 RPL26L1Q9UNX3 145 aaKnown RBP12.33□□□□□ -0.44
RAPGEF3-219ENST00000549151 ENDOD1O94919 500 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 GABRB2P47870 512 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 CACNA2D1P54289 1103 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 OLIG2Q13516 323 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 ACAP1Q15027 740 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 PPM1JQ5JR12 505 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 CELF3Q5SZQ8 465 aaKnown RBP12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 ILDR2Q71H61 639 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 CCNJLQ8IV13 435 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 CCNYQ8ND76 341 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 NDRG1Q92597 394 aaKnown RBP12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 PPP1R36Q96LQ0 422 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 C7orf26Q96N11 449 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 PACSIN3Q9UKS6 424 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 TPP1O14773 563 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 PAPSS1O43252 624 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 PFKMP08237 780 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 ANPEPP15144 967 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 RPS12P25398 132 aaKnown RBP12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 HDAC4P56524 1084 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 PDK2Q15119 407 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 RALGPS1Q5JS13 557 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 SESTD1Q86VW0 696 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 FAM131BQ86XD5 332 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 FAM149B1Q96BN6 582 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 ZNF184Q99676 751 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 IFT122Q9HBG6 1241 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 TMPRSS4Q9NRS4 437 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 ZNF358Q9NW07 568 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 NDE1Q9NXR1 346 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 SIRPGQ9P1W8 387 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 PPM1HQ9ULR3 514 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 G3BP2Q9UN86 482 aaKnown RBP12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 HES2Q9Y543 173 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 PARP14Q460N5 1801 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 MCM3APO60318 1980 aa12.32□□□□□ -0.44
RAPGEF3-219ENST00000549151 TGFB3P10600 412 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 DESP17661 470 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 TGM2P21980 687 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 PRKCHP24723 683 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 AP1B1Q10567 949 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 IRGCQ6NXR0 463 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 ZNF534Q76KX8 674 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 WDR75Q8IWA0 830 aaKnown RBP12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 HACE1Q8IYU2 909 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 AGAP3Q96P47 875 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 PDZD7Q9H5P4 517 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 GBA2Q9HCG7 927 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 PRMT7Q9NVM4 692 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 PNPOQ9NVS9 261 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 ANGPTL2Q9UKU9 493 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 AP4E1Q9UPM8 1137 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 C2CD2Q9Y426 696 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 PSAT1Q9Y617 370 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 IGKV6-21A0A0C4DH24 114 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 CAPN14A8MX76 684 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 GOT1P17174 413 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 MGAT1P26572 445 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 IRX1P78414 480 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 PPP2R5DQ14738 602 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 TEX44Q53QW1 395 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 LCLAT1Q6UWP7 414 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 RIOX2Q8IUF8 465 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 CDKL3Q8IVW4 592 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 NME8Q8N427 588 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 SLC26A7Q8TE54 656 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 FAM136AQ96C01 138 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 DPEP3Q9H4B8 488 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 TXNDC16Q9P2K2 825 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 TRDMT1O14717 391 aaKnown RBP12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 USP12O75317 370 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 NPTXRO95502 500 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 ZNF286BP0CG31 522 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 CCDC130P13994 396 aa12.31□□□□□ -0.44
RAPGEF3-219ENST00000549151 MLH1P40692 756 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms