RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 SPATA31A1Q5TZJ5 1347 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 FAM227AF5H4B4 570 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 FOXN3O00409 490 aaPredicted RBP4.75□□□□□ -1.65
CNOT2-216ENST00000548939 TMEM225BP0DP42 221 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 TXNP10599 105 aaKnown RBP4.75□□□□□ -1.65
CNOT2-216ENST00000548939 TGFB3P10600 412 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 RBL1P28749 1068 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 CDC25AP30304 524 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 GALNSP34059 522 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 WDR5P61964 334 aaKnown RBP4.75□□□□□ -1.65
CNOT2-216ENST00000548939 RPS16P62249 146 aaKnown RBP4.75□□□□□ -1.65
CNOT2-216ENST00000548939 RHDQ02161 417 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 CLCA4Q14CN2 919 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 CNGA2Q16280 664 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 ZNF585BQ52M93 769 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 P3H2Q8IVL5 708 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 KIAA0319LQ8IZA0 1049 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 KRT78Q8N1N4 520 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 ZCWPW1Q9H0M4 648 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 MRPL44Q9H9J2 332 aaKnown RBP4.75□□□□□ -1.65
CNOT2-216ENST00000548939 MLXIPLQ9NP71 852 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 DECR2Q9NUI1 292 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 TYW1Q9NV66 732 aaKnown RBP4.75□□□□□ -1.65
CNOT2-216ENST00000548939 SEMA5BQ9P283 1151 aa4.75□□□□□ -1.65
CNOT2-216ENST00000548939 RGS17Q9UGC6 210 aaPredicted RBP4.75□□□□□ -1.65
CNOT2-216ENST00000548939 IQGAP2Q13576 1575 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 TTC37Q6PGP7 1564 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 DISP1Q96F81 1524 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 CTIFO43310 598 aaKnown RBP4.74□□□□□ -1.65
CNOT2-216ENST00000548939 FRS3O43559 492 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 RFPL1O75677 317 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 INMTO95050 263 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 TMIGD3P0DMS9 266 aaPredicted RBP4.74□□□□□ -1.65
CNOT2-216ENST00000548939 RPS6KB1P23443 525 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 ALDH7A1P49419 539 aaKnown RBP4.74□□□□□ -1.65
CNOT2-216ENST00000548939 SLC12A2P55011 1212 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 KCNAB1Q14722 419 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 MZT2AQ6P582 158 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 B4GALNT4Q76KP1 1039 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 TFAP2DQ7Z6R9 452 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 B4GALNT2Q8NHY0 566 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 GPATCH3Q96I76 525 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 TUBB6Q9BUF5 446 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 CDH19Q9H159 772 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 CHST8Q9H2A9 424 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 SLCO5A1Q9H2Y9 848 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 AGO4Q9HCK5 861 aaKnown RBP4.74□□□□□ -1.65
CNOT2-216ENST00000548939 VPS45Q9NRW7 570 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 ITGB1BP2Q9UKP3 347 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 COG5Q9UP83 839 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 FRMPD1Q5SYB0 1578 aa4.74□□□□□ -1.65
CNOT2-216ENST00000548939 SLC22A23A1A5C7 686 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 C4orf47A7E2U8 309 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 F8W810 466 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 TLX3O43711 291 aaPredicted RBP4.73□□□□□ -1.65
CNOT2-216ENST00000548939 NDUFB8O95169 186 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 IL1R1P14778 569 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 BTF3P20290 206 aaKnown RBP4.73□□□□□ -1.65
CNOT2-216ENST00000548939 YY1P25490 414 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 HOXA7P31268 230 aaPredicted RBP4.73□□□□□ -1.65
CNOT2-216ENST00000548939 COPAP53621 1224 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 MTA1Q13330 715 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 PLAG1Q6DJT9 500 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 GRHL2Q6ISB3 625 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 C18orf65Q6ZTR6 163 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 RFX8Q6ZV50 586 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 FSTL5Q8N475 847 aaPredicted RBP4.73□□□□□ -1.65
CNOT2-216ENST00000548939 ASB5Q8WWX0 329 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 RUNDC1Q96C34 613 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 ZDHHC12Q96GR4 267 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 TMEM204Q9BSN7 226 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 MSRB1Q9NZV6 116 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 COL20A1Q9P218 1284 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 VPS51Q9UID3 782 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 OGDHLQ9ULD0 1010 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 L1RE1Q9UN81 338 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 HEMK1Q9Y5R4 338 aaPredicted RBP4.73□□□□□ -1.65
CNOT2-216ENST00000548939 TTC3P53804 2025 aa4.73□□□□□ -1.65
CNOT2-216ENST00000548939 DENND4BO75064 1496 aaPredicted RBP4.73□□□□□ -1.65
CNOT2-216ENST00000548939 NCOA1Q15788 1441 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 ZFYVE16Q7Z3T8 1539 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 KIAA0556O60303 1618 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 BIVM-ERCC5R4GMW8 1640 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 SETD1AO15047 1707 aaKnown RBP4.72□□□□□ -1.65
CNOT2-216ENST00000548939 TMEM272A0A1B0GTI8 110 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 EME2A4GXA9 379 aaPredicted RBP4.72□□□□□ -1.65
CNOT2-216ENST00000548939 C16orf96A6NNT2 1141 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 ZNF814B7Z6K7 855 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 PRPF3O43395 683 aaKnown RBP4.72□□□□□ -1.65
CNOT2-216ENST00000548939 EPN2O95208 641 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 MBPP02686 304 aaPredicted RBP4.72□□□□□ -1.65
CNOT2-216ENST00000548939 ZXDBP98169 803 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 FMO1Q01740 532 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 DNASE1L3Q13609 305 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 MANEALQ5VSG8 457 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 RBM44Q6ZP01 1051 aaKnown RBP4.72□□□□□ -1.65
CNOT2-216ENST00000548939 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.72□□□□□ -1.65
CNOT2-216ENST00000548939 SLC44A5Q8NCS7 719 aa4.72□□□□□ -1.65
CNOT2-216ENST00000548939 IPCEF1Q8WWN9 437 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms