RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 COBLL1Q53SF7 1204 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 SGO2Q562F6 1265 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 EGFLAMQ63HQ2 1017 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 PMS2CLQ68D20 193 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 RNF43Q68DV7 783 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 LPCAT2Q7L5N7 544 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 CYP2U1Q7Z449 544 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 TRMT11Q7Z4G4 463 aaKnown RBP7.03□□□□□ -1.28
SCAF11-211ENST00000547950 C11orf74Q86VG3 221 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 CREBRFQ8IUR6 639 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 DENND1CQ8IV53 801 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 ARHGAP18Q8N392 663 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 TERB1Q8NA31 727 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 OLIG1Q8TAK6 271 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 EDEM1Q92611 657 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 SLC35C1Q96A29 364 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 IPO9Q96P70 1041 aaKnown RBP7.03□□□□□ -1.28
SCAF11-211ENST00000547950 CDK5RAP1Q96SZ6 601 aaKnown RBP7.03□□□□□ -1.28
SCAF11-211ENST00000547950 DUSP9Q99956 384 aaKnown RBP7.03□□□□□ -1.28
SCAF11-211ENST00000547950 ULBP1Q9BZM6 244 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 LRRC4Q9HBW1 653 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 METTL14Q9HCE5 456 aaKnown RBP7.03□□□□□ -1.28
SCAF11-211ENST00000547950 CLIC5Q9NZA1 410 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 MARCH2Q9P0N8 246 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 MBD1Q9UIS9 605 aaPredicted RBP7.03□□□□□ -1.28
SCAF11-211ENST00000547950 TSPAN16Q9UKR8 245 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 HCN2Q9UL51 889 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 KIAA1257Q9ULG3 409 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 STRIP2Q9ULQ0 834 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 COQ4Q9Y3A0 265 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 PCDHB4Q9Y5E5 795 aa7.03□□□□□ -1.28
SCAF11-211ENST00000547950 PATJQ8NI35 1801 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 PATE3B3GLJ2 98 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 PRRT4C9JH25 899 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 PIK3R2O00459 728 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 XPO1O14980 1071 aaKnown RBP7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CACNG3O60359 315 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 GADD45BO75293 160 aaPredicted RBP7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CALCAP01258 141 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 VDRP11473 427 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 HOXB2P14652 356 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 GABRG2P18507 467 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 BMP6P22004 513 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CORO1AP31146 461 aaKnown RBP7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CLCN1P35523 988 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CHKAP35790 457 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 P2RY2P41231 377 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 PTGER3P43115 390 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 FMO5P49326 533 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 RGS7P49802 495 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 MMP16P51512 607 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 LIMK1P53667 647 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 STX17P56962 302 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 IRX4P78413 519 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 ADIGQ0VDE8 80 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CETN1Q12798 172 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 MAP7D1Q3KQU3 841 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 RAB41Q5JT25 222 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 N4BP2L1Q5TBK1 243 aaPredicted RBP7.02□□□□□ -1.29
SCAF11-211ENST00000547950 BSPRYQ5W0U4 402 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 KIAA1211LQ6NV74 962 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 TMEM270Q6UE05 265 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 RRAGAQ7L523 313 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 ZC3H3Q8IXZ2 948 aaKnown RBP7.02□□□□□ -1.29
SCAF11-211ENST00000547950 SIX6OS1Q8N1H7 587 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 PPM1KQ8N3J5 372 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 ZNF276Q8N554 614 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 IPO4Q8TEX9 1081 aaKnown RBP7.02□□□□□ -1.29
SCAF11-211ENST00000547950 DDI1Q8WTU0 396 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 RNF139Q8WU17 664 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 NELFBQ8WX92 580 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 TFAP2BQ92481 460 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 DDX1Q92499 740 aaKnown RBP7.02□□□□□ -1.29
SCAF11-211ENST00000547950 KAT5Q92993 513 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 P2RY11Q96G91 374 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 SPACA7Q96KW9 195 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CEP63Q96MT8 703 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CNTNAP3BQ96NU0 1288 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 EDEM2Q9BV94 578 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CNTNAP3Q9BZ76 1288 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 DCLK3Q9C098 648 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 FAM124BQ9H5Z6 455 aaPredicted RBP7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CACNA2D2Q9NY47 1150 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 MARK1Q9P0L2 795 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 SFMBT1Q9UHJ3 866 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 AGO1Q9UL18 857 aaKnown RBP7.02□□□□□ -1.29
SCAF11-211ENST00000547950 CTNND2Q9UQB3 1225 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 ZNF510Q9Y2H8 683 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 STARD13Q9Y3M8 1113 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 RAD54BQ9Y620 910 aa7.02□□□□□ -1.29
SCAF11-211ENST00000547950 TCHHQ07283 1943 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 DMXL1Q9Y485 3027 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 NUP210Q8TEM1 1887 aaPredicted RBP7.01□□□□□ -1.29
SCAF11-211ENST00000547950 A0A1W2PQF6 199 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 LNP1A1A4G5 178 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 YJEFN3A6XGL0 299 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 E7ENQ6 273 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 RNF225M0QZC1 329 aaPredicted RBP7.01□□□□□ -1.29
SCAF11-211ENST00000547950 O00370 1275 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 TM4SF5O14894 197 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms