RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 PCDHB4Q9Y5E5 795 aa12.31□□□□□ -0.44
RBFOX1-208ENST00000547372 DGKBQ9Y6T7 804 aa12.31□□□□□ -0.44
RBFOX1-208ENST00000547372 ZBBXA8MT70 800 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 RFX1P22670 979 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 WDR45BQ5MNZ6 344 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 GPATCH4Q5T3I0 446 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 RFPL4BQ6ZWI9 263 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 ZC3H7AQ8IWR0 971 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 RHOT1Q8IXI2 618 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 CADM3Q8N126 398 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 SLC43A3Q8NBI5 491 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 FAM84AQ96KN4 292 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 GLT8D2Q9H1C3 349 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 POLR1BQ9H9Y6 1135 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 C17orf75Q9HAS0 396 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 ACSS2Q9NR19 701 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 ADA2Q9NZK5 511 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 SERPINB13Q9UIV8 391 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 CACNA1SQ13698 1873 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 SF3B1O75533 1304 aaKnown RBP eCLIP12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 F5H423 210 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 H7C0C1 242 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 TAF4O00268 1085 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 PLOD2O00469 737 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 TOR1BO14657 336 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 SLC16A4O15374 487 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 BAIAP3O94812 1187 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 MAGP20916 626 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 TCF7P36402 384 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 ATP5OP48047 213 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 CACNB3P54284 484 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 NSUN2Q08J23 767 aaKnown RBP eCLIP12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 CES4AQ5XG92 561 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 BORAQ6PGQ7 559 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 USP43Q70EL4 1123 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 TBC1D15Q8TC07 691 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 TFB1MQ8WVM0 346 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 PGBD4Q96DM1 585 aa12.3□□□□□ -0.44
RBFOX1-208ENST00000547372 ANKRD36CQ5JPF3 1778 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 LOC102724428A0A0B4J2F2 783 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 HNRNPDLO14979 420 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CD1EP15812 388 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 KCNA2P16389 499 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 ELK3P41970 407 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 SIK1P57059 783 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 EN1Q05925 392 aaPredicted RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 E2F2Q14209 437 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 SLC9A4Q6AI14 798 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 DEPDC4Q8N2C3 294 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 NAT16Q8N8M0 369 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 SUN5Q8TC36 379 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CGREF1Q99674 301 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 C1orf21Q9H246 121 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 PLEKHA5Q9HAU0 1116 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 PCSK1NQ9UHG2 260 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 MAGED2Q9UNF1 606 aaPredicted RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 ARAP2Q8WZ64 1704 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 C7orf72A4D263 438 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 hCG_1984214I3L0E3 225 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 KPNA4O00629 521 aaPredicted RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CPA3P15088 417 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CKMT2P17540 419 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 SAT1P21673 171 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 RPL26P61254 145 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CTBSQ01459 385 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 FMO1Q01740 532 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 BRDTQ58F21 947 aaPredicted RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CHSY1Q86X52 802 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 ATP6V1E2Q96A05 226 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CBWD1Q9BRT8 395 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 FRMD8Q9BZ67 464 aaPredicted RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 HIPK3Q9H422 1215 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 RIOX1Q9H6W3 641 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 NRDE2Q9H7Z3 1164 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 TCRBV7S3A2A0A539 114 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 DDX5P17844 614 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 ETV4P43268 484 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 YAP1P46937 504 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CLK3P49761 638 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 THOP1P52888 689 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 GPR162Q16538 588 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 TMEM270Q6UE05 265 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 KCNT2Q6UVM3 1135 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CPXCR1Q8N123 301 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CATSPER1Q8NEC5 780 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 PDCD6IPQ8WUM4 868 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 FAR2Q96K12 515 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 MARK4Q96L34 752 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 NACC1Q96RE7 527 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 ZNF577Q9BSK1 485 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 ACSS3Q9H6R3 686 aa12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 CLK4Q9HAZ1 481 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 C20orf96Q9NUD7 363 aaPredicted RBP12.29□□□□□ -0.44
RBFOX1-208ENST00000547372 TBC1D14Q9P2M4 693 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms