RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 DNAJB7Q7Z6W7 309 aaPredicted RBP18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 DCP1BQ8IZD4 617 aaKnown RBP18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 STKLD1Q8NE28 680 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 EXD1Q8NHP7 514 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 SPPL2BQ8TCT7 592 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 GPR152Q8TDT2 470 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 C2orf15Q8WU43 125 aaKnown RBP18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 ATP6V1G3Q96LB4 118 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 IL21Q9HBE4 155 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 TMBIM4Q9HC24 238 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 ASAH2Q9NR71 780 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 ZDHHC18Q9NUE0 388 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 WDR35Q9P2L0 1181 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 PLAAQ9Y263 795 aa18.02■□□□□ 0.47
RBFOX1-207ENST00000547338 CACNA1HO95180 2353 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 KRBA1A5PL33 1030 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 NDC80O14777 642 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 RARAP10276 462 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 SRFP11831 508 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 ALDH1A3P47895 512 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 LHX1P48742 406 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 SMARCB1Q12824 385 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 PIGHQ14442 188 aaPredicted RBP18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 SIX1Q15475 284 aaPredicted RBP18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 TEAD2Q15562 447 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 MGAT5BQ3V5L5 792 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 CWF19L1Q69YN2 538 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 TANGO2Q6ICL3 276 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 KDM7AQ6ZMT4 941 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 CCDC105Q8IYK2 499 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 RCOR2Q8IZ40 523 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 ELMOD1Q8N336 334 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 BBOF1Q8ND07 529 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 BCO2Q9BYV7 579 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 SLC2A4RGQ9NR83 387 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 WHRNQ9P202 907 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 KIAA1257Q9ULG3 409 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 PCDHB5Q9Y5E4 795 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 NFS1Q9Y697 457 aa18.01■□□□□ 0.47
RBFOX1-207ENST00000547338 A0A1W2PRU2 124 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 TMEM191CA6NGB0 347 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 ECEL1O95672 775 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 CFHP08603 1231 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 NUDT17P0C025 328 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 HMGA1P17096 107 aaKnown RBP18■□□□□ 0.47
RBFOX1-207ENST00000547338 ITIH2P19823 946 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 CYP2F1P24903 491 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 MARCKSL1P49006 195 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 TUFMP49411 452 aaKnown RBP18■□□□□ 0.47
RBFOX1-207ENST00000547338 GSCP56915 257 aaPredicted RBP18■□□□□ 0.47
RBFOX1-207ENST00000547338 PSMC1P62191 440 aaKnown RBP18■□□□□ 0.47
RBFOX1-207ENST00000547338 TSPY1Q01534 308 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 DHX9Q08211 1270 aaKnown RBP18■□□□□ 0.47
RBFOX1-207ENST00000547338 TRADDQ15628 312 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 ZSCAN26Q16670 478 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 WDR72Q3MJ13 1102 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 ZNF667Q5HYK9 610 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 CYP4A22Q5TCH4 519 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 SDHAF4Q5VUM1 108 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 MTSS1LQ765P7 747 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 TMEM150AQ86TG1 271 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 LEMD2Q8NC56 503 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 ATL2Q8NHH9 583 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 RSPRY1Q96DX4 576 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 RBM41Q96IZ5 413 aaKnown RBP18■□□□□ 0.47
RBFOX1-207ENST00000547338 ASB16Q96NS5 453 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 SYT15Q9BQS2 421 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 CAPS2Q9BXY5 557 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 MIS12Q9H081 205 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 SDCBP2Q9H190 292 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 SMYD3Q9H7B4 428 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 ASB3Q9Y575 518 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 OBSL1O75147 1896 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 COL4A2P08572 1712 aa18■□□□□ 0.47
RBFOX1-207ENST00000547338 ZNF197O14709 1029 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 GAS8O95995 478 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 PTPN7P35236 360 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 CCNG2Q16589 344 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 NFE2Q16621 373 aaPredicted RBP17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 SGO2Q562F6 1265 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 DDX42Q86XP3 938 aaKnown RBP eCLIP17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 NIPA2Q8N8Q9 360 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 CCHCR1Q8TD31 782 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 GIPC2Q8TF65 315 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 BTBD6Q96KE9 485 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 C11orf70Q9BRQ4 267 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 TMEM109Q9BVC6 243 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 DPEP3Q9H4B8 488 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 DDX56Q9NY93 547 aaKnown RBP17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 DENND4CQ5VZ89 1909 aa17.99■□□□□ 0.47
RBFOX1-207ENST00000547338 ECI2O75521 394 aa17.98■□□□□ 0.47
RBFOX1-207ENST00000547338 PDGFRBP09619 1106 aa17.98■□□□□ 0.47
RBFOX1-207ENST00000547338 PCSK1P29120 753 aa17.98■□□□□ 0.47
RBFOX1-207ENST00000547338 CALCOCO2Q13137 446 aa17.98■□□□□ 0.47
RBFOX1-207ENST00000547338 ACAP1Q15027 740 aa17.98■□□□□ 0.47
RBFOX1-207ENST00000547338 TTMPQ5BVD1 217 aa17.98■□□□□ 0.47
RBFOX1-207ENST00000547338 CEP85LQ5SZL2 805 aa17.98■□□□□ 0.47
RBFOX1-207ENST00000547338 HOOK3Q86VS8 718 aa17.98■□□□□ 0.47
RBFOX1-207ENST00000547338 SIX5Q8N196 739 aa17.98■□□□□ 0.47
RBFOX1-207ENST00000547338 TMEM105Q8N8V8 129 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms