RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 E5RJQ4 531 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 TRDMT1O14717 391 aaKnown RBP12.64□□□□□ -0.39
HDAC7-226ENST00000547259 RPP40O75818 363 aaKnown RBP12.64□□□□□ -0.39
HDAC7-226ENST00000547259 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-226ENST00000547259 NDUFA10O95299 355 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 CALB1P05937 261 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 GZMAP12544 262 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 DRD1P21728 446 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 SOX9P48436 509 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 TKTL1P51854 596 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 RUNX3Q13761 415 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 ZNF268Q14587 947 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-226ENST00000547259 PDGFRLQ15198 375 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 SPA17Q15506 151 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 STXBP5Q5T5C0 1151 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 ALKBH5Q6P6C2 394 aaKnown RBP12.64□□□□□ -0.39
HDAC7-226ENST00000547259 TXNDC11Q6PKC3 985 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 PHF13Q86YI8 300 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-226ENST00000547259 GAB3Q8WWW8 586 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 ZFYVE19Q96K21 471 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 CEP295NLQ96MC4 621 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 MIS12Q9H081 205 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 LUC7LQ9NQ29 371 aaKnown RBP12.64□□□□□ -0.39
HDAC7-226ENST00000547259 TDP1Q9NUW8 608 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 EHD2Q9NZN4 543 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 ADAM22Q9P0K1 906 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 MAGED2Q9UNF1 606 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-226ENST00000547259 NCANO14594 1321 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 EIF3CLB5ME19 914 aaKnown RBP12.63□□□□□ -0.39
HDAC7-226ENST00000547259 TNFRSF10BO14763 440 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 FTLP02792 175 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-226ENST00000547259 ERBB2P04626 1255 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 ZNF806P0C7X5 589 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 MMP8P22894 467 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
HDAC7-226ENST00000547259 NR1H3Q13133 447 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 AASDHQ4L235 1098 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-226ENST00000547259 C2CD6Q53TS8 623 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 TMEM196Q5HYL7 178 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 RAB41Q5JT25 222 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 OR6B2Q6IFH4 312 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 Q6ZS52 159 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 MON1BQ7L1V2 547 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 C11orf74Q86VG3 221 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 DNAAF5Q86Y56 855 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 SCAMP5Q8TAC9 235 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 ZNF653Q96CK0 615 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 C18orf8Q96DM3 657 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 TRIM11Q96F44 468 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 ZNF830Q96NB3 372 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-226ENST00000547259 LRRC3BQ96PB8 259 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 EIF3CQ99613 913 aaKnown RBP12.63□□□□□ -0.39
HDAC7-226ENST00000547259 FAM83CQ9BQN1 747 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 SLC4A5Q9BY07 1137 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 SLC46A2Q9BY10 475 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 ULBP1Q9BZM6 244 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 KCNF1Q9H3M0 494 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 FBXO44Q9H4M3 255 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 IL21Q9HBE4 155 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 COMMD8Q9NX08 183 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 TJP2Q9UDY2 1190 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 STRIP2Q9ULQ0 834 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 NENFQ9UMX5 172 aa12.63□□□□□ -0.39
HDAC7-226ENST00000547259 EPN1Q9Y6I3 576 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-226ENST00000547259 GOLGA8SH3BPF8 625 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 FBXO21O94952 628 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 LCA5LO95447 670 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 PRAMEF12O95522 483 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 ABCB4P21439 1286 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 YWHAQP27348 245 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 RPL34P49207 117 aaKnown RBP12.62□□□□□ -0.39
HDAC7-226ENST00000547259 USP46P62068 366 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 CYP4F8P98187 520 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 TNK2Q07912 1038 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 DMWDQ09019 674 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 C10orf76Q5T2E6 689 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 FAM183BPQ6ZVS7 135 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 TMEM110Q86TL2 294 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 MON1AQ86VX9 555 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 MCOLN2Q8IZK6 566 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 CPA6Q8N4T0 437 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 MAB21L3Q8N8X9 362 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 ACRBPQ8NEB7 543 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 TTC8Q8TAM2 541 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 FBXO32Q969P5 355 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 ACDQ96AP0 544 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 ZC3H10Q96K80 434 aaKnown RBP12.62□□□□□ -0.39
HDAC7-226ENST00000547259 DESI2Q9BSY9 194 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 ISCUQ9H1K1 167 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 CNGB3Q9NQW8 809 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 CHD6Q8TD26 2715 aa12.62□□□□□ -0.39
HDAC7-226ENST00000547259 ANAPC1Q9H1A4 1944 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 AXIN1O15169 862 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 PAPSS1O43252 624 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-226ENST00000547259 ATMINO43313 823 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-226ENST00000547259 GABBR2O75899 941 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 RHOBTB1O94844 696 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 EPN2O95208 641 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 ZBED1O96006 694 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms