RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 FRMD8Q9BZ67 464 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 NXF3Q9H4D5 531 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 SMG5Q9UPR3 1016 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 LMNAP02545 664 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 FGFR1P11362 822 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 CTSEP14091 401 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 CCND3P30281 292 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 SLC8A1P32418 973 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 SERPINB8P50452 374 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 C21orf59P57076 290 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 FPGSQ05932 587 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 CUL3Q13618 768 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 MROH9Q5TGP6 573 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 C9orf57Q5W0N0 161 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 LRP10Q7Z4F1 713 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 TRMT11Q7Z4G4 463 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 ARNTL2Q8WYA1 636 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 ATG4AQ8WYN0 398 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 TTPALQ9BTX7 342 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 NDE1Q9NXR1 346 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 RPTORQ8N122 1335 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 LRRC37A3O60309 1634 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 CNTNAP1P78357 1384 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 LOC102724159A0A0B4J2E5 919 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 A8MX80 341 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 KPNA3O00505 521 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 TRDMT1O14717 391 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 ADRB2P07550 413 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 HIRAP54198 1017 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 GCNT1Q02742 428 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 STX3Q13277 289 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 PWP2Q15269 919 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 CCL14Q16627 93 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 DENND1BQ6P3S1 775 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 FAM183BPQ6ZVS7 135 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 CEP68Q76N32 757 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 TMEM161BQ8NDZ6 487 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 MED8Q96G25 268 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 NMRK1Q9NWW6 199 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 ZNF510Q9Y2H8 683 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 MYH2Q9UKX2 1941 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 DYRK3O43781 588 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 LGR5O75473 907 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 PTPN7P35236 360 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 FNTAP49354 379 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 PSEN1P49768 467 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 ITGB3BPQ13352 177 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 SETMARQ53H47 684 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 FBXL19Q6PCT2 694 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 RGS9BPQ6ZS82 235 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 GPR152Q8TDT2 470 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 IRX2Q9BZI1 471 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 BRD8Q9H0E9 1235 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 TRMT13Q9NUP7 481 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 MAP10Q9P2G4 905 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 SPASTQ9UBP0 616 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 PCDHA2Q9Y5H9 948 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 RPS6KL1Q9Y6S9 549 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 KDM3BQ7LBC6 1761 aa9.3□□□□□ -0.92
MTHFD1-202ENST00000545908 CLDN5O00501 218 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 CCDC22O60826 627 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 ADH1CP00326 375 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 ACRP10323 421 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 AMPD1P23109 780 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 CDC25CP30307 473 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 NR2C2P49116 596 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 CBWD6Q4V339 395 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 CBWD3Q5JTY5 395 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 CBWD5Q5RIA9 395 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 SDHAF4Q5VUM1 108 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 OLFML2BQ68BL8 750 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 PTAR1Q7Z6K3 402 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 HES6Q96HZ4 224 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 APOL2Q9BQE5 337 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 NLNQ9BYT8 704 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 RNPEPQ9H4A4 650 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 TEKT2Q9UIF3 430 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 MEI4A8MW99 385 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 FGRP09769 529 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 OCM2P0CE71 109 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 OCMP0CE72 109 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 ITGB6P18564 788 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 POLR2LP62875 67 aaKnown RBP9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 LRRC74AQ0VAA2 488 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 TMED1Q13445 227 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 DDR2Q16832 855 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 GRIN3AQ8TCU5 1115 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 TCF25Q9BQ70 676 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 ARHGAP26Q9UNA1 814 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 STAU1O95793 577 aaKnown RBP9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 NCALDP61601 193 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 PRKAA1Q13131 559 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 LRIG3Q6UXM1 1119 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 KIRREL3Q8IZU9 778 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 MAB21L3Q8N8X9 362 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 OTULINQ96BN8 352 aa9.29□□□□□ -0.92
MTHFD1-202ENST00000545908 MAGEB10Q96LZ2 347 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms