RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 FUBP1Q96AE4 644 aaKnown RBP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 SDCCAG3Q96C92 435 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 CTHRC1Q96CG8 243 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 HVCN1Q96D96 273 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 MYEOVQ96EZ4 313 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 PRR25Q96S07 402 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 EIF3CQ99613 913 aaKnown RBP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ARHGAP39Q9C0H5 1083 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 PLEKHA2Q9HB19 425 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 NDUFAF4Q9P032 175 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 SLC13A4Q9UKG4 626 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 RAB21Q9UL25 225 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 DERAQ9Y315 318 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 RRP7AQ9Y3A4 280 aaKnown RBP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 PCDHB2Q9Y5E7 798 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 BCORL1Q5H9F3 1711 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 LMTK3Q96Q04 1460 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 CD109Q6YHK3 1445 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 CDK13Q14004 1512 aaKnown RBP4.19□□□□□ -1.74
SCFD1-207ENST00000544052 CENPVL1A0A0U1RR11 272 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 TMEM200CA6NKL6 621 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 EFCAB8A8MWE9 144 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 SLC16A3O15427 465 aaKnown RBP4.19□□□□□ -1.74
SCFD1-207ENST00000544052 PMPCBO75439 489 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 HEXIM1O94992 359 aaKnown RBP4.19□□□□□ -1.74
SCFD1-207ENST00000544052 CD19P15391 556 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 MCM5P33992 734 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 THBS4P35443 961 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 FOXD4Q12950 439 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-207ENST00000544052 KCNJ12Q14500 433 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 ZNF569Q5MCW4 686 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 MAP3K21Q5TCX8 1036 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 DGAT2L7PQ6IED9 249 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 CCDC144NLQ6NUI1 221 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 VWA1Q6PCB0 445 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 C16orf89Q6UX73 402 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 C1orf122Q6ZSJ8 110 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 P3H2Q8IVL5 708 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 REXO5Q96IC2 774 aaKnown RBP4.19□□□□□ -1.74
SCFD1-207ENST00000544052 LIN7CQ9NUP9 197 aaKnown RBP4.19□□□□□ -1.74
SCFD1-207ENST00000544052 TBCCD1Q9NVR7 557 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 ZBTB1Q9Y2K1 713 aa4.19□□□□□ -1.74
SCFD1-207ENST00000544052 SETD1BQ9UPS6 1966 aaKnown RBP4.19□□□□□ -1.74
SCFD1-207ENST00000544052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.19□□□□□ -1.74
SCFD1-207ENST00000544052 MADDQ8WXG6 1647 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 PSMD9O00233 223 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 YY2O15391 372 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 LARGE1O95461 756 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 GKP32189 559 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 PLP2Q04941 152 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 ZNF484Q5JVG2 852 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 SPDYAQ5MJ70 313 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 ARMC6Q6NXE6 501 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 LNX2Q8N448 690 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 LRRC71Q8N4P6 559 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 NPIPB3Q92617 1050 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 STAMQ92783 540 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 RFKQ969G6 155 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 PLEKHG4BQ96PX9 1271 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 PAAF1Q9BRP4 392 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 GPR63Q9BZJ6 419 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 PARPBPQ9NWS1 579 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 AURKAIP1Q9NWT8 199 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-207ENST00000544052 TESQ9UGI8 421 aaKnown RBP4.18□□□□□ -1.74
SCFD1-207ENST00000544052 TRPC5Q9UL62 973 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-207ENST00000544052 PCDHA10Q9Y5I2 948 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 KAT6BQ8WYB5 2073 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 KIF14Q15058 1648 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 CCDC187A0A096LP49 1063 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 AGAP5A6NIR3 686 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 PROM1O43490 865 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 HNRNPA1P09651 372 aaKnown RBP eCLIP4.18□□□□□ -1.74
SCFD1-207ENST00000544052 C1SP09871 688 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 IFIT1P09914 478 aaKnown RBP4.18□□□□□ -1.74
SCFD1-207ENST00000544052 CPA1P15085 419 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 CREB1P16220 341 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 ITPKBP27987 946 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 ELF1P32519 619 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 RXRGP48443 463 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 PDE1AP54750 535 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 E2F1Q01094 437 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 AAK1Q2M2I8 961 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 TIGD2Q4W5G0 525 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 GPATCH4Q5T3I0 446 aaKnown RBP4.18□□□□□ -1.74
SCFD1-207ENST00000544052 FAAH2Q6GMR7 532 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 KIAA1324Q6UXG2 1013 aaKnown RBP4.18□□□□□ -1.74
SCFD1-207ENST00000544052 PCYOX1LQ8NBM8 494 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 LINS1Q8NG48 757 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 TFAP2BQ92481 460 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 RSPRY1Q96DX4 576 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 REEP2Q9BRK0 252 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 HERC2P3Q9BVR0 1158 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 ZNF703Q9H7S9 590 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-207ENST00000544052 SAP30LQ9HAJ7 183 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 NOD2Q9HC29 1040 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 KLC4Q9NSK0 619 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 FBXO28Q9NVF7 368 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 VPS4AQ9UN37 437 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 TMEM98Q9Y2Y6 226 aa4.18□□□□□ -1.74
SCFD1-207ENST00000544052 GXYLT2A0PJZ3 443 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms