RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 PEAR1Q5VY43 1037 aaPredicted RBP13.73□□□□□ -0.21
RTN3-212ENST00000543123 PSAPL1Q6NUJ1 521 aa13.73□□□□□ -0.21
RTN3-212ENST00000543123 DENND1CQ8IV53 801 aa13.73□□□□□ -0.21
RTN3-212ENST00000543123 DDI1Q8WTU0 396 aa13.73□□□□□ -0.21
RTN3-212ENST00000543123 KCTD13Q8WZ19 329 aa13.73□□□□□ -0.21
RTN3-212ENST00000543123 GOLGA1Q92805 767 aa13.73□□□□□ -0.21
RTN3-212ENST00000543123 CNGB3Q9NQW8 809 aa13.73□□□□□ -0.21
RTN3-212ENST00000543123 ABCC13Q9NSE7 274 aa13.73□□□□□ -0.21
RTN3-212ENST00000543123 CACNA2D2Q9NY47 1150 aa13.73□□□□□ -0.21
RTN3-212ENST00000543123 PILRBQ9UKJ0 227 aa13.73□□□□□ -0.21
RTN3-212ENST00000543123 CEP295Q9C0D2 2601 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 PATE3B3GLJ2 98 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 O00370 1275 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 TIMM44O43615 452 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 SYNCRIPO60506 623 aaKnown RBP13.72□□□□□ -0.21
RTN3-212ENST00000543123 NDUFS2O75306 463 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 LATS1O95835 1130 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 GNA14O95837 355 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 CFIP05156 583 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 CSRP1P21291 193 aaKnown RBP13.72□□□□□ -0.21
RTN3-212ENST00000543123 PMLP29590 882 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 ATXN3P54252 364 aaPredicted RBP13.72□□□□□ -0.21
RTN3-212ENST00000543123 IRX4P78413 519 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 SHC2P98077 582 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 ARID5AQ03989 594 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 LRMPQ12912 555 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 DUOXA1Q1HG43 343 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 MPPE1Q53F39 396 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 SYCP2LQ5T4T6 812 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 N4BP2L1Q5TBK1 243 aaPredicted RBP13.72□□□□□ -0.21
RTN3-212ENST00000543123 SLC23A3Q6PIS1 610 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 TMEM270Q6UE05 265 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 LCLAT1Q6UWP7 414 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 KIAA1324Q6UXG2 1013 aaKnown RBP13.72□□□□□ -0.21
RTN3-212ENST00000543123 FMNL3Q8IVF7 1028 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 FAM217AQ8IXS0 508 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 SCML4Q8N228 414 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 PPM1KQ8N3J5 372 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 FOXJ1Q92949 421 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 ACOX2Q99424 681 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 HCN2Q9UL51 889 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 CYP8B1Q9UNU6 501 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 PCDHB4Q9Y5E5 795 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 STON1Q9Y6Q2 735 aa13.72□□□□□ -0.21
RTN3-212ENST00000543123 IGHV1OR15-9A0A0B4J2B8 117 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 CEACAM1P13688 526 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 ITPKAP23677 461 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 GFPT1Q06210 699 aaPredicted RBP13.71□□□□□ -0.21
RTN3-212ENST00000543123 ZNF33AQ06730 810 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 TRIP4Q15650 581 aaPredicted RBP13.71□□□□□ -0.21
RTN3-212ENST00000543123 BSPRYQ5W0U4 402 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 KLHL10Q6JEL2 608 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 KIAA1211LQ6NV74 962 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 UBR7Q8N806 425 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 FRMD1Q8N878 549 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 ZNF557Q8N988 423 aaPredicted RBP13.71□□□□□ -0.21
RTN3-212ENST00000543123 IRGQQ8WZA9 623 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 ERCC4Q92889 916 aaPredicted RBP13.71□□□□□ -0.21
RTN3-212ENST00000543123 MRGPRX1Q96LB2 322 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 IRX2Q9BZI1 471 aaPredicted RBP13.71□□□□□ -0.21
RTN3-212ENST00000543123 SLC32A1Q9H598 525 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 CD248Q9HCU0 757 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 THAP10Q9P2Z0 257 aaPredicted RBP13.71□□□□□ -0.21
RTN3-212ENST00000543123 SUSD2Q9UGT4 822 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 MAN1B1Q9UKM7 699 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 SLC6A14Q9UN76 642 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 RAD54BQ9Y620 910 aa13.71□□□□□ -0.21
RTN3-212ENST00000543123 TNRC6BQ9UPQ9 1833 aaKnown RBP13.71□□□□□ -0.22
RTN3-212ENST00000543123 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 ATXN2Q99700 1313 aaKnown RBP13.7□□□□□ -0.22
RTN3-212ENST00000543123 M0QYV0 167 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 TULP2O00295 520 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 CDX4O14627 284 aaPredicted RBP13.7□□□□□ -0.22
RTN3-212ENST00000543123 SART1O43290 800 aaKnown RBP13.7□□□□□ -0.22
RTN3-212ENST00000543123 FBXO21O94952 628 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 FGFR1OPO95684 399 aaKnown RBP13.7□□□□□ -0.22
RTN3-212ENST00000543123 SERPINF2P08697 491 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 GNSP15586 552 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 ENGP17813 658 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 MAPK8P45983 427 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 GCNT1Q02742 428 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 ZNF252P-AS1Q0IIN9 211 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 CNGA2Q16280 664 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 GEN1Q17RS7 908 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 UAP1L1Q3KQV9 507 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 WDR45BQ5MNZ6 344 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 ADGRF1Q5T601 910 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 SH3PXD2AQ5TCZ1 1133 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 NUGGCQ68CJ6 796 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 TTI2Q6NXR4 508 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 BHLHA9Q7RTU4 235 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 METTL3Q86U44 580 aaKnown RBP13.7□□□□□ -0.22
RTN3-212ENST00000543123 HDDC3Q8N4P3 179 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 UBA3Q8TBC4 463 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 WFIKKN2Q8TEU8 576 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 NELFBQ8WX92 580 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 PIWIL1Q96J94 861 aaKnown RBP13.7□□□□□ -0.22
RTN3-212ENST00000543123 HSPA12BQ96MM6 686 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 TRIM62Q9BVG3 475 aa13.7□□□□□ -0.22
RTN3-212ENST00000543123 CIPCQ9C0C6 399 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms