RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 FAM47DPA6NHR8 397 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 ADCY6O43306 1168 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 HSPA4LO95757 839 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 BAG2O95816 211 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 ZNF865P0CJ78 1059 aaPredicted RBP10.47□□□□□ -0.73
TOP3A-208ENST00000542570 RPL22P35268 128 aaKnown RBP10.47□□□□□ -0.73
TOP3A-208ENST00000542570 TAF10Q12962 218 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 KLHL38Q2WGJ6 581 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 C17orf99Q6UX52 265 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 TMC3Q7Z5M5 1100 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 ZNF280BQ86YH2 543 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 KLHL29Q96CT2 875 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 STAMBPL1Q96FJ0 436 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 CCT8L2Q96SF2 557 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 ZCWPW1Q9H0M4 648 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 HACD3Q9P035 362 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 RRP15Q9Y3B9 282 aaKnown RBP10.47□□□□□ -0.73
TOP3A-208ENST00000542570 NAV1Q8NEY1 1877 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.47□□□□□ -0.73
TOP3A-208ENST00000542570 SLC10A3P09131 477 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 MGAT1P26572 445 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 LSP1P33241 339 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 ASPHQ12797 758 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 ZNF177Q13360 481 aaPredicted RBP10.47□□□□□ -0.73
TOP3A-208ENST00000542570 STAT4Q14765 748 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 E2F5Q15329 346 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 PSMD5Q16401 504 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 HFE2Q6ZVN8 426 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 UNC93AQ86WB7 457 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 CIR1Q86X95 450 aaPredicted RBP10.47□□□□□ -0.73
TOP3A-208ENST00000542570 LRRC52Q8N7C0 313 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 OR6K2Q8NGY2 324 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 TTC8Q8TAM2 541 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 RAB3IL1Q8TBN0 382 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 HNRNPLLQ8WVV9 542 aaKnown RBP10.47□□□□□ -0.73
TOP3A-208ENST00000542570 TM6SF2Q9BZW4 377 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.47□□□□□ -0.73
TOP3A-208ENST00000542570 CATSPERBQ9H7T0 1116 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 ETNK1Q9HBU6 452 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 MIOSQ9NXC5 875 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 ANGPTL3Q9Y5C1 460 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 VGLL3A8MV65 326 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 F5H5T6 163 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 RARGP13631 454 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 NOS2P35228 1153 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 OGDHQ02218 1023 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 PDK2Q15119 407 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 RFWD3Q6PCD5 774 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 LCLAT1Q6UWP7 414 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 PTAR1Q7Z6K3 402 aaPredicted RBP10.47□□□□□ -0.73
TOP3A-208ENST00000542570 CCDC185Q8N715 623 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 MRPS31Q92665 395 aaKnown RBP10.47□□□□□ -0.73
TOP3A-208ENST00000542570 CORO1BQ9BR76 489 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 FICDQ9BVA6 458 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 DUSP16Q9BY84 665 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 NPHS2Q9NP85 383 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 RAB21Q9UL25 225 aa10.47□□□□□ -0.73
TOP3A-208ENST00000542570 WDR27A2RRH5 827 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 CABYRO75952 493 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 MT-CO1P00395 513 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 UNGP13051 313 aaPredicted RBP10.46□□□□□ -0.73
TOP3A-208ENST00000542570 SELPP16109 830 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 HSP90AA5PQ58FG0 334 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 ANKRD20A8PQ5CZ79 823 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 LVRNQ6Q4G3 990 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 TRMT10CQ7L0Y3 403 aaKnown RBP10.46□□□□□ -0.73
TOP3A-208ENST00000542570 LRRC6Q86X45 466 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 NT5DC4Q86YG4 428 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 DENND1CQ8IV53 801 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 HTR3CQ8WXA8 447 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 CHST12Q9NRB3 414 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 DNAJB4Q9UDY4 337 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 GIT1Q9Y2X7 761 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 PCDHB12Q9Y5F1 795 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 NRAPQ86VF7 1730 aa10.46□□□□□ -0.73
TOP3A-208ENST00000542570 CFAP69A5D8W1 941 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 TTC4O95801 387 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 F9P00740 461 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 GJA1P17302 382 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 IL1R2P27930 398 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 PSMB4P28070 264 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 GPD2P43304 727 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 PITX1P78337 314 aaPredicted RBP10.46□□□□□ -0.74
TOP3A-208ENST00000542570 MRPS5P82675 430 aaKnown RBP10.46□□□□□ -0.74
TOP3A-208ENST00000542570 PLEKHA7Q6IQ23 1121 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 EMID1Q96A84 441 aaPredicted RBP10.46□□□□□ -0.74
TOP3A-208ENST00000542570 RNF157Q96PX1 679 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 TMEM209Q96SK2 561 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 RASSF4Q9H2L5 321 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 C12orf65Q9H3J6 166 aaKnown RBP10.46□□□□□ -0.74
TOP3A-208ENST00000542570 LSM7Q9UK45 103 aaKnown RBP10.46□□□□□ -0.74
TOP3A-208ENST00000542570 LAMA4Q16363 1823 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 A0A1W2PQH9 124 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 H0Y3Z8 333 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 TFE3P19532 575 aaPredicted RBP10.46□□□□□ -0.74
TOP3A-208ENST00000542570 SLC11A2P49281 568 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 GPR15P49685 360 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 FASTKD3Q14CZ7 662 aaKnown RBP10.46□□□□□ -0.74
TOP3A-208ENST00000542570 TTC31Q49AM3 519 aaPredicted RBP10.46□□□□□ -0.74
TOP3A-208ENST00000542570 TAF1BQ53T94 588 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms