RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 KLHL2O95198 593 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 ITGB1P05556 798 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 KRT7P08729 469 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 T-ENOLP0DO92 83 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 CPA3P15088 417 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 EPHB2P29323 1055 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 POLR2BP30876 1174 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 STIP1P31948 543 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 CHKAP35790 457 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 PGM1P36871 562 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 GCLMP48507 274 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 NRIP1P48552 1158 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 RARRES1P49788 294 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 VCPP55072 806 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 NCKAP1LP55160 1127 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 YWHAEP62258 255 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 NFX1Q12986 1120 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 SNX1Q13596 522 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 ACAP1Q15027 740 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 RCN1Q15293 331 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 SNRNP35Q16560 246 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 HADHQ16836 314 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 CCDC142Q17RM4 750 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 TMEM259Q4ZIN3 620 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 ZC2HC1CQ53FD0 456 aaPredicted RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 ZNF484Q5JVG2 852 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 SPOUT1Q5T280 376 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 STXBP5Q5T5C0 1151 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 OR52E8Q6IFG1 317 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 TAF2Q6P1X5 1199 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 ZNF449Q6P9G9 518 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 TSHZ1Q6ZSZ6 1077 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 HAUS6Q7Z4H7 955 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 ZC3H18Q86VM9 953 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 RNF135Q8IUD6 432 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 PASD1Q8IV76 773 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 PALM2Q8IXS6 379 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 THNSL1Q8IYQ7 743 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 KLHL23Q8NBE8 558 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 FAM81AQ8TBF8 368 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 NCSTNQ92542 709 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 ZNF689Q96CS4 500 aaPredicted RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 MFSD14AQ96MC6 490 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 BTBD9Q96Q07 612 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 PHOX2BQ99453 314 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 APOL5Q9BWW9 433 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 TMEM117Q9H0C3 514 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 DHX33Q9H6R0 707 aaKnown RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 CDHR5Q9HBB8 845 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 MKS1Q9NXB0 559 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 CD207Q9UJ71 328 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 LRFN2Q9ULH4 789 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 PADI3Q9ULW8 664 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 BARX2Q9UMQ3 279 aaPredicted RBP10.78□□□□□ -0.68
CHFR-219ENST00000541341 FAM50BQ9Y247 325 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 TRPV2Q9Y5S1 764 aa10.78□□□□□ -0.68
CHFR-219ENST00000541341 TECTAO75443 2155 aa10.77□□□□□ -0.68
CHFR-219ENST00000541341 ZNF318Q5VUA4 2279 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 IGKV6-21A0A0C4DH24 114 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 ARHGAP10A1A4S6 786 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 MBLAC1A4D2B0 266 aaPredicted RBP10.77□□□□□ -0.69
CHFR-219ENST00000541341 C19orf67A6NJJ6 358 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 C5orf67F2Z3F1 127 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 M0QZ92 97 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 ZBTB39O15060 712 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 BIRC5O15392 142 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 PEX1O43933 1283 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 MGEA5O60502 916 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 SPAG7O75391 227 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 CYP1A1P04798 512 aaPredicted RBP10.77□□□□□ -0.69
CHFR-219ENST00000541341 RB1P06400 928 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 WEE2P0C1S8 567 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 RALAP11233 206 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 PIM1P11309 404 aaPredicted RBP10.77□□□□□ -0.69
CHFR-219ENST00000541341 DESP17661 470 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 KRT4P19013 534 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 ACAT1P24752 427 aaKnown RBP10.77□□□□□ -0.69
CHFR-219ENST00000541341 CRABP2P29373 138 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 HSPA13P48723 471 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 MARCKSL1P49006 195 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 ARSEP51690 589 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 DMP1Q13316 513 aaPredicted RBP10.77□□□□□ -0.69
CHFR-219ENST00000541341 MED21Q13503 144 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 MPP2Q14168 576 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 SMAD2Q15796 467 aaKnown RBP10.77□□□□□ -0.69
CHFR-219ENST00000541341 CTC1Q2NKJ3 1217 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 TFDP3Q5H9I0 405 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 THEMIS2Q5TEJ8 643 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 SLFN12LQ6IEE8 588 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 PLEKHA7Q6IQ23 1121 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 ACAD11Q709F0 780 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 ARCQ7LC44 396 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 MTDHQ86UE4 582 aaKnown RBP10.77□□□□□ -0.69
CHFR-219ENST00000541341 ARHGEF19Q8IW93 802 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 SCUBE1Q8IWY4 988 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 EXOC8Q8IYI6 725 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 FEZF2Q8TBJ5 459 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 SPPL3Q8TCT6 385 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 KCNV2Q8TDN2 545 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 PARD3BQ8TEW8 1205 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms