RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 PTPN18Q99952 460 aa9.85□□□□□ -0.83
TTC39C-203ENST00000540918 AVENQ9NQS1 362 aaPredicted RBP9.85□□□□□ -0.83
TTC39C-203ENST00000540918 NOCTQ9UK39 431 aaKnown RBP9.85□□□□□ -0.83
TTC39C-203ENST00000540918 CITO14578 2027 aa9.85□□□□□ -0.83
TTC39C-203ENST00000540918 ZBTB22O15209 634 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 SNX2O60749 519 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 LRCH4O75427 683 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 CAPN15O75808 1086 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 DGKIO75912 1065 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 TTC4O95801 387 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 SYN1P17600 705 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 KRT33BQ14525 404 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 FOXR1Q6PIV2 292 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ANGPTL8Q6UXH0 198 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 FAM35AQ86V20 835 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ATP6V0D2Q8N8Y2 350 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 VCPIP1Q96JH7 1222 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 KLHL5Q96PQ7 755 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 TTC1Q99614 292 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ACSS2Q9NR19 701 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ZFP69BQ9UJL9 534 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 TMEM191CA6NGB0 347 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 NDUFS3O75489 264 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 F9P00740 461 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 HADHAP40939 763 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ACLYP53396 1101 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 JAM2P57087 298 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ZNF844Q08AG5 666 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 PKN2Q16513 984 aaKnown RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 TMCO2Q7Z6W1 182 aaPredicted RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 WNT8BQ93098 351 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 CINPQ9BW66 212 aaPredicted RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 APOBEC2Q9Y235 224 aaKnown RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 PLCH1Q4KWH8 1693 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 CHD4Q14839 1912 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 EIF3HO15372 352 aaKnown RBP eCLIP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 F7P08709 466 aaPredicted RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ERCC2P18074 760 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 PSMB4P28070 264 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 RPL22P35268 128 aaKnown RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ZNF143P52747 638 aaPredicted RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 GEMIN4P57678 1058 aaKnown RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 TARBP2Q15633 366 aaKnown RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 THEMIS2Q5TEJ8 643 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ZCCHC23Q6ZST2 131 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 SYDE1Q6ZW31 735 aaPredicted RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 SZRD1Q7Z422 152 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 NEUROG2Q9H2A3 272 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 VIPAS39Q9H9C1 493 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 OLA1Q9NTK5 396 aaKnown RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 AGRPO00253 132 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 GYG2O15488 501 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 RIPK2O43353 540 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 VAPBO95292 243 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 TBX18O95935 607 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 SNRPAP09012 282 aaKnown RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ERVK-10P10266 1014 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 RAB27AP51159 221 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 PLK1P53350 603 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 CHI3L2Q15782 390 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 ZNF792Q3KQV3 632 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 PRSS55Q6UWB4 352 aaPredicted RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 DENND1CQ8IV53 801 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 OR52K1Q8NGK4 314 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 TRIB2Q92519 343 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 PCED1BQ96HM7 432 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 MAGEB5Q9BZ81 275 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 C12orf65Q9H3J6 166 aaKnown RBP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 NINJ2Q9NZG7 142 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.84□□□□□ -0.83
TTC39C-203ENST00000540918 SLC30A1Q9Y6M5 507 aa9.84□□□□□ -0.83
TTC39C-203ENST00000540918 SKAP2O75563 359 aaPredicted RBP9.83□□□□□ -0.84
TTC39C-203ENST00000540918 ENO1P06733 434 aaKnown RBP9.83□□□□□ -0.84
TTC39C-203ENST00000540918 NOVP48745 357 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 GATMP50440 423 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 STX1BP61266 288 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 RPL10AP62906 217 aaKnown RBP9.83□□□□□ -0.84
TTC39C-203ENST00000540918 DPYSL3Q14195 570 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 PSMD5Q16401 504 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 ANKRD20A8PQ5CZ79 823 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 TAPT1Q6NXT6 567 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 C16orf46Q6P387 395 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 TTC27Q6P3X3 843 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 FAM228AQ86W67 206 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 RASAL3Q86YV0 1011 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 YAF2Q8IY57 180 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 ARHGAP24Q8N264 748 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 ERP27Q96DN0 273 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 CORO1BQ9BR76 489 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 TRIM62Q9BVG3 475 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.83□□□□□ -0.84
TTC39C-203ENST00000540918 KANSL3Q9P2N6 904 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 PTPRZ1P23471 2315 aaPredicted RBP9.83□□□□□ -0.84
TTC39C-203ENST00000540918 ADGRA2Q96PE1 1338 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 FANCGO15287 622 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 RHOCP08134 193 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 RAD51Q06609 339 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 ART3Q13508 389 aa9.83□□□□□ -0.84
TTC39C-203ENST00000540918 MUM1Q2TAK8 710 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms