RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 RXFP2Q8WXD0 754 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 PPP1R36Q96LQ0 422 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 OLFM3Q96PB7 478 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 FAM159BA6NKW6 160 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 M0QYV0 167 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 MICAL2O94851 1124 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 OATP04181 439 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 USP46P62068 366 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 PDE1CQ14123 709 aaPredicted RBP14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 KRT81Q14533 505 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 PDPK2PQ6A1A2 396 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 SNRNP48Q6IEG0 339 aaKnown RBP14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 RSBN1LQ6PCB5 846 aaPredicted RBP14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 ADGRG6Q86SQ4 1221 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 PCDH19Q8TAB3 1148 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 HIC2Q96JB3 615 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 ZNF302Q9NR11 478 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 DDX18Q9NVP1 670 aaKnown RBP14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 BTBD7Q9P203 1132 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 AK5Q9Y6K8 562 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 SLC4A7Q9Y6M7 1214 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 E9PBE3 544 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 H0YIN7 160 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 ZBTB14O43829 449 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 CREB3O43889 395 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 KLHL41O60662 606 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 PEX10O60683 326 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 ENDOD1O94919 500 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 GJB1P08034 283 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 HOXC6P09630 235 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 ATP6V1B1P15313 513 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 PDGFRAP16234 1089 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 SCNN1BP51168 640 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 CHN2P52757 468 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 TBL3Q12788 808 aaKnown RBP14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 PCLAFQ15004 111 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 TBCCQ15814 346 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 METTL25Q8N6Q8 603 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 SLC4A11Q8NBS3 891 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 GSDMBQ8TAX9 411 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 PRPF31Q8WWY3 499 aaKnown RBP14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 PGBD4Q96DM1 585 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 ELOVL4Q9GZR5 314 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 HSFX1Q9UBD0 423 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 FZD1Q9UP38 647 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 WDR27A2RRH5 827 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 TRDMT1O14717 391 aaKnown RBP14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 VILLO15195 856 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 PRKCGP05129 697 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 BCAR1P56945 870 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 DEUP1Q05D60 604 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 CASC4Q6P4E1 433 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 RBM44Q6ZP01 1051 aaKnown RBP14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 ACTRT2Q8TDY3 377 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 EBNA1BP2Q99848 306 aaKnown RBP14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 KLC2Q9H0B6 622 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 IFT122Q9HBG6 1241 aa14.37□□□□□ -0.11
SCNN1A-215ENST00000540037 CCDC160A6NGH7 325 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 BIRC5O15392 142 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 MSCO60682 206 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 TFE3P19532 575 aaPredicted RBP14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 RGS7P49802 495 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 ANKRD20A4Q4UJ75 823 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 BSPRYQ5W0U4 402 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 CES3Q6UWW8 571 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 TNS4Q8IZW8 715 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 NME8Q8N427 588 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 ATXN7L3BQ96GX2 97 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 PHF12Q96QT6 1004 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 NGRNQ9NPE2 291 aaKnown RBP14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 ATXN10Q9UBB4 475 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 PGAP2Q9UHJ9 254 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 APPL1Q9UKG1 709 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 MFHAS1Q9Y4C4 1052 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 MGAMO43451 1857 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 ZNF195O14628 629 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 B4GALT5O43286 388 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 ADCY3O60266 1144 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 TBC1D12O60347 775 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 DKC1O60832 514 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 TFAP2AP05549 437 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 PMLP29590 882 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 TCF7P36402 384 aaPredicted RBP14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 GBE1Q04446 702 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 SLC10A2Q12908 348 aaPredicted RBP14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 LRRC71Q8N4P6 559 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 RNF148Q8N7C7 305 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 MCRS1Q96EZ8 462 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 LHX5Q9H2C1 402 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 ASNSD1Q9NWL6 643 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 MKS1Q9NXB0 559 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 GALNT8Q9NY28 637 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 TMEM216Q9P0N5 145 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 PHF24Q9UPV7 400 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 BPTFQ12830 3046 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 PRPSAP2O60256 369 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 ASLP04424 464 aa14.36□□□□□ -0.11
SCNN1A-215ENST00000540037 ZNF143P52747 638 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms