RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 RPL10AP62906 217 aaKnown RBP17.52■□□□□ 0.39
COPS3-212ENST00000539941 CALCOCO2Q13137 446 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 ARL13BQ3SXY8 428 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 PPP6R3Q5H9R7 873 aaPredicted RBP17.52■□□□□ 0.39
COPS3-212ENST00000539941 BTBD8Q5XKL5 378 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 KIAA1841Q6NSI8 718 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 RSPO2Q6UXX9 243 aaPredicted RBP17.52■□□□□ 0.39
COPS3-212ENST00000539941 GSTA5Q7RTV2 222 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 MON1AQ86VX9 555 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 PQLC3Q8N755 202 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 BBOF1Q8ND07 529 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 PCDH19Q8TAB3 1148 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 RIN2Q8WYP3 895 aaPredicted RBP17.52■□□□□ 0.39
COPS3-212ENST00000539941 P3H4Q92791 437 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 LRRC45Q96CN5 670 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 HAUS1Q96CS2 278 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 SNF8Q96H20 258 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 PGLYRP2Q96PD5 576 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 KCTD15Q96SI1 283 aaPredicted RBP17.52■□□□□ 0.39
COPS3-212ENST00000539941 FMO2Q99518 471 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 FAM118BQ9BPY3 351 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 VN1R3Q9BXE9 311 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 DDIT4Q9NX09 232 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 SPG21Q9NZD8 308 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 STK39Q9UEW8 545 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 FBXW11Q9UKB1 542 aa17.52■□□□□ 0.39
COPS3-212ENST00000539941 LAMA3Q16787 3333 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 NDC80O14777 642 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 IGLV3-25P01717 112 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 FAM153BP0C7A2 387 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 ITIH2P19823 946 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 KLRC2P26717 231 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 ADRA1BP35368 520 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 PPM1AP35813 382 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 HSPA9P38646 679 aaKnown RBP17.51■□□□□ 0.39
COPS3-212ENST00000539941 CXCR3P49682 368 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 ARPP19P56211 112 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 CAV1Q03135 178 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 NOMO1Q15155 1222 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 DDR2Q16832 855 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 FAM153CQ494X1 144 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 PRSS55Q6UWB4 352 aaPredicted RBP17.51■□□□□ 0.39
COPS3-212ENST00000539941 RNF19BQ6ZMZ0 732 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 COLGALT1Q8NBJ5 622 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 DQX1Q8TE96 717 aaKnown RBP17.51■□□□□ 0.39
COPS3-212ENST00000539941 EDEM1Q92611 657 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 YME1L1Q96TA2 773 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 NEUROG2Q9H2A3 272 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 HSFX1Q9UBD0 423 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 MTRF1LQ9UGC7 380 aaKnown RBP17.51■□□□□ 0.39
COPS3-212ENST00000539941 FAM153AQ9UHL3 310 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 HPCAL4Q9UM19 191 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 CDY1Q9Y6F8 540 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 MRPL42Q9Y6G3 142 aaKnown RBP17.51■□□□□ 0.39
COPS3-212ENST00000539941 MYO16Q9Y6X6 1858 aa17.51■□□□□ 0.39
COPS3-212ENST00000539941 A0A1W2PPC1 479 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 H3BRJ5 948 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 VNN2O95498 520 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 KRT14P02533 472 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 ATF2P15336 505 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 NR2C2P49116 596 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 EIF3EP60228 445 aaKnown RBP17.5■□□□□ 0.39
COPS3-212ENST00000539941 DSG1Q02413 1049 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 ZDHHC24Q6UX98 284 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 LRRC31Q6UY01 552 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 DENND5BQ6ZUT9 1274 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 GPR65Q8IYL9 337 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 PLD5Q8N7P1 536 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 ART4Q93070 314 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 GDAP1L1Q96MZ0 367 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 CSPG4P5Q96PW8 444 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 SMOC2Q9H3U7 446 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 PCDH9Q9HC56 1237 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 AAASQ9NRG9 546 aa17.5■□□□□ 0.39
COPS3-212ENST00000539941 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.5■□□□□ 0.39
COPS3-212ENST00000539941 ATXN2Q99700 1313 aaKnown RBP17.5■□□□□ 0.39
COPS3-212ENST00000539941 SYNJ2BP-COX16A0A087WUM0 186 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 A6NNZ2 444 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 FGBP02675 491 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 PECAM1P16284 738 aaPredicted RBP17.49■□□□□ 0.39
COPS3-212ENST00000539941 IVDP26440 423 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 GLUD2P49448 558 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 PLTPP55058 493 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 ROR1Q01973 937 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 FPGSQ05932 587 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 IFRD2Q12894 506 aaPredicted RBP17.49■□□□□ 0.39
COPS3-212ENST00000539941 MGAT5BQ3V5L5 792 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 TUBB8Q3ZCM7 444 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 FAM117BQ6P1L5 589 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 SCD5Q86SK9 330 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 DDX53Q86TM3 631 aaKnown RBP17.49■□□□□ 0.39
COPS3-212ENST00000539941 TAC4Q86UU9 113 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 COX16Q9P0S2 106 aa17.49■□□□□ 0.39
COPS3-212ENST00000539941 RBP3P10745 1247 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 YWHAQP27348 245 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 ADCY8P40145 1251 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 TUFMP49411 452 aaKnown RBP17.48■□□□□ 0.39
COPS3-212ENST00000539941 GPR15P49685 360 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 EIF4EBP2Q13542 120 aaPredicted RBP17.48■□□□□ 0.39
COPS3-212ENST00000539941 MTMR3Q13615 1198 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms