RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 AGBL2Q5U5Z8 902 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 ZNF280DQ6N043 979 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 TAS1R1Q7RTX1 841 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 PPIL6Q8IXY8 311 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 NETO2Q8NC67 525 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 DQX1Q8TE96 717 aaKnown RBP23.26■■□□□ 1.31
HOMER3-204ENST00000539827 NTAN1Q96AB6 310 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 TMEM175Q9BSA9 504 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 RCOR3Q9P2K3 495 aaPredicted RBP23.26■■□□□ 1.31
HOMER3-204ENST00000539827 SHOC2Q9UQ13 582 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 PCDHB5Q9Y5E4 795 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 SNX10Q9Y5X0 201 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 TCRBV7S3A2A0A539 114 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 BCLAF3A2AJT9 711 aaKnown RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 FAM72CH0Y354 149 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 EEF2KO00418 725 aaKnown RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 PARNO95453 639 aaKnown RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 MAGEA4P43358 317 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 LMAN1P49257 510 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 BASP1P80723 227 aaKnown RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 HP1BP3Q5SSJ5 553 aaPredicted RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 FAM72AQ5TYM5 149 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 FAM72DQ6L9T8 149 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 FAM72BQ86X60 149 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 BCL7CQ8WUZ0 217 aaPredicted RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 ZNF333Q96JL9 665 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 TMEM39AQ9NV64 488 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 NOVA2Q9UNW9 492 aaKnown RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 FNDC1Q4ZHG4 1894 aaPredicted RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 SF3B1O75533 1304 aaKnown RBP eCLIP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 NDC80O14777 642 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 F9P00740 461 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 BTBD8Q5XKL5 378 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 FAM43BQ6ZT52 329 aaPredicted RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 HOOK3Q86VS8 718 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 CDKL3Q8IVW4 592 aaPredicted RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 TTC9BQ8N6N2 239 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 NAT8LQ8N9F0 302 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 ATAD1Q8NBU5 361 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 EPS8L3Q8TE67 593 aaKnown RBP23.25■■□□□ 1.31
HOMER3-204ENST00000539827 WDCPQ9H6R7 721 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 DTLQ9NZJ0 730 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 TBX21Q9UL17 535 aa23.25■■□□□ 1.31
HOMER3-204ENST00000539827 CFAP69A5D8W1 941 aa23.24■■□□□ 1.31
HOMER3-204ENST00000539827 OR6C75A6NL08 312 aa23.24■■□□□ 1.31
HOMER3-204ENST00000539827 CXCR3P49682 368 aa23.24■■□□□ 1.31
HOMER3-204ENST00000539827 RTP2Q5QGT7 225 aa23.24■■□□□ 1.31
HOMER3-204ENST00000539827 KCNT2Q6UVM3 1135 aa23.24■■□□□ 1.31
HOMER3-204ENST00000539827 SCD5Q86SK9 330 aa23.24■■□□□ 1.31
HOMER3-204ENST00000539827 FUBP3Q96I24 572 aaKnown RBP eCLIP23.24■■□□□ 1.31
HOMER3-204ENST00000539827 MFSD11O43934 449 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 NR2C2P49116 596 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 ATP1A2P50993 1020 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 ARL13BQ3SXY8 428 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 RSPO2Q6UXX9 243 aaPredicted RBP23.23■■□□□ 1.31
HOMER3-204ENST00000539827 LRRC43Q8N309 656 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 RNF34Q969K3 372 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 TKTL2Q9H0I9 626 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.23■■□□□ 1.31
HOMER3-204ENST00000539827 MICAL3Q7RTP6 2002 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 BANF1O75531 89 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 SOAT2O75908 522 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 CPB1P15086 417 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 SLCO1A2P46721 670 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 AIF1P55008 147 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 SCAPQ12770 1279 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 XRCC4Q13426 336 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 IKBKEQ14164 716 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 FASTKD3Q14CZ7 662 aaKnown RBP23.23■■□□□ 1.31
HOMER3-204ENST00000539827 SLC45A4Q5BKX6 768 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 VSTM1Q6UX27 236 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 CEP128Q6ZU80 1094 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 RFX8Q6ZV50 586 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 RELL1Q8IUW5 271 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 VWCEQ96DN2 955 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 C8orf48Q96LL4 319 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 NMUR1Q9HB89 426 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 ABCC13Q9NSE7 274 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 NUDT5Q9UKK9 219 aa23.23■■□□□ 1.31
HOMER3-204ENST00000539827 A0A1W2PQH9 124 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 TMEM63AO94886 807 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 NR1D1P20393 614 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 ACTN2P35609 894 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 DPYSQ14117 519 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 SYCP2LQ5T4T6 812 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 C1orf53Q5VUE5 145 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 CNKSR3Q6P9H4 555 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 ZNF771Q7L3S4 317 aaPredicted RBP23.22■■□□□ 1.31
HOMER3-204ENST00000539827 NUP93Q8N1F7 819 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 GPR152Q8TDT2 470 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 RTP4Q96DX8 246 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 QKIQ96PU8 341 aaKnown RBP eCLIP23.22■■□□□ 1.31
HOMER3-204ENST00000539827 ZMYND15Q9H091 742 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 PSD3Q9NYI0 1048 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 PAK5Q9P286 719 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 SFMBT1Q9UHJ3 866 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 XPO7Q9UIA9 1087 aaKnown RBP23.22■■□□□ 1.31
HOMER3-204ENST00000539827 SLC27A5Q9Y2P5 690 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 NR2E3Q9Y5X4 410 aa23.22■■□□□ 1.31
HOMER3-204ENST00000539827 COL4A4P53420 1690 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms