RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ADGRF2Q8IZF7 708 aa14.55□□□□□ -0.08
UBE3B-210ENST00000539599 DEPDC1BQ8WUY9 529 aa14.55□□□□□ -0.08
UBE3B-210ENST00000539599 TMEM40Q8WWA1 233 aa14.55□□□□□ -0.08
UBE3B-210ENST00000539599 SLC4A5Q9BY07 1137 aa14.55□□□□□ -0.08
UBE3B-210ENST00000539599 RNF181Q9P0P0 153 aa14.55□□□□□ -0.08
UBE3B-210ENST00000539599 PPARGC1AQ9UBK2 798 aaKnown RBP14.55□□□□□ -0.08
UBE3B-210ENST00000539599 FETUBQ9UGM5 382 aa14.55□□□□□ -0.08
UBE3B-210ENST00000539599 GYG2O15488 501 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 GSC2O15499 205 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 CREB3O43889 395 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 RECQL4O94761 1208 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 SMPD1P17405 629 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 SLC26A2P50443 739 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 AQP5P55064 265 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 FAM187BQ17R55 369 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 BOLA3Q53S33 107 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 C4orf50Q6ZRC1 276 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 CATSPER4Q7RTX7 472 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 VPS52Q8N1B4 723 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 SLC25A41Q8N5S1 370 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 KBTBD7Q8WVZ9 684 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 USP6NLQ92738 828 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 MPHOSPH6Q99547 160 aaKnown RBP14.54□□□□□ -0.08
UBE3B-210ENST00000539599 HTTP42858 3142 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 A6NJR5 290 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 AP1B1Q10567 949 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 ACAP1Q15027 740 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 RCN1Q15293 331 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 TMEM110Q86TL2 294 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 NRG4Q8WWG1 115 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 AZIN2Q96A70 460 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 ALKBH8Q96BT7 664 aaKnown RBP14.54□□□□□ -0.08
UBE3B-210ENST00000539599 AGAP3Q96P47 875 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 PPCSQ9HAB8 311 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 C2CD2Q9Y426 696 aa14.54□□□□□ -0.08
UBE3B-210ENST00000539599 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.53□□□□□ -0.08
UBE3B-210ENST00000539599 BCLAF3A2AJT9 711 aaKnown RBP14.53□□□□□ -0.08
UBE3B-210ENST00000539599 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 SNAI1O95863 264 aaPredicted RBP14.53□□□□□ -0.08
UBE3B-210ENST00000539599 MGAT1P26572 445 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 NME3Q13232 169 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 PEX6Q13608 980 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 HFE2Q6ZVN8 426 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 NUDCD3Q8IVD9 361 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 E2F7Q96AV8 911 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 NSL1Q96IY1 281 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 BTBD10Q9BSF8 475 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 NFKBIZQ9BYH8 718 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 ADARB2Q9NS39 739 aaKnown RBP14.53□□□□□ -0.08
UBE3B-210ENST00000539599 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.53□□□□□ -0.08
UBE3B-210ENST00000539599 SUFUQ9UMX1 484 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 WASF2Q9Y6W5 498 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 KCNK1O00180 336 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 ATP5HO75947 161 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 KRT37O76014 449 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 SORBS2O94875 1100 aaKnown RBP14.53□□□□□ -0.08
UBE3B-210ENST00000539599 ESRRAP11474 423 aaPredicted RBP14.53□□□□□ -0.08
UBE3B-210ENST00000539599 TGM2P21980 687 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 TUBP50607 506 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 LAMC2Q13753 1193 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 PDK2Q15119 407 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 CHSY1Q86X52 802 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 EXOC8Q8IYI6 725 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 DEFB106AQ8N104 65 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 RNF169Q8NCN4 708 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 MICAL1Q8TDZ2 1067 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 EBNA1BP2Q99848 306 aaKnown RBP14.53□□□□□ -0.08
UBE3B-210ENST00000539599 PPME1Q9Y570 386 aa14.53□□□□□ -0.08
UBE3B-210ENST00000539599 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.52□□□□□ -0.08
UBE3B-210ENST00000539599 PRKCHP24723 683 aa14.52□□□□□ -0.08
UBE3B-210ENST00000539599 MLH1P40692 756 aa14.52□□□□□ -0.08
UBE3B-210ENST00000539599 ADIGQ0VDE8 80 aa14.52□□□□□ -0.08
UBE3B-210ENST00000539599 DCAF6Q58WW2 860 aa14.52□□□□□ -0.08
UBE3B-210ENST00000539599 SYPL2Q5VXT5 272 aa14.52□□□□□ -0.08
UBE3B-210ENST00000539599 HEATR6Q6AI08 1181 aaKnown RBP14.52□□□□□ -0.08
UBE3B-210ENST00000539599 EFCAB3Q8N7B9 438 aa14.52□□□□□ -0.08
UBE3B-210ENST00000539599 CCNYQ8ND76 341 aa14.52□□□□□ -0.08
UBE3B-210ENST00000539599 NAF1Q96HR8 494 aaKnown RBP14.52□□□□□ -0.08
UBE3B-210ENST00000539599 ZNF778Q96MU6 729 aa14.52□□□□□ -0.08
UBE3B-210ENST00000539599 SNX10Q9Y5X0 201 aa14.52□□□□□ -0.08
UBE3B-210ENST00000539599 LAMA2P24043 3122 aaKnown RBP14.52□□□□□ -0.08
UBE3B-210ENST00000539599 MEIS3P2A8K0S8 358 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 FAM72CH0Y354 149 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 ERVK-10P10266 1014 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 PSMB4P28070 264 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 ARRB2P32121 409 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 TEX44Q53QW1 395 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 VWA5B1Q5TIE3 1220 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 FAM72AQ5TYM5 149 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 C9orf57Q5W0N0 161 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 FAM72DQ6L9T8 149 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 CMC1Q7Z7K0 106 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 RSPH3Q86UC2 560 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 FAM72BQ86X60 149 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 POU5F2Q8N7G0 328 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 PPTC7Q8NI37 304 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 MCUR1Q96AQ8 359 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 RTP4Q96DX8 246 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 SNX27Q96L92 541 aa14.52□□□□□ -0.09
UBE3B-210ENST00000539599 ZNF670Q9BS34 389 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms