RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 UROC1Q96N76 676 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 FNBP1Q96RU3 617 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 FOXB1Q99853 325 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 FSD1Q9BTV5 496 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 ITPAQ9BY32 194 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 RANBP17Q9H2T7 1088 aaKnown RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 GREM2Q9H772 168 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 MLXIPQ9HAP2 919 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SEPSECSQ9HD40 501 aaKnown RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 LMBRD1Q9NUN5 540 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 TDP1Q9NUW8 608 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 INTS10Q9NVR2 710 aaKnown RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 TBCCD1Q9NVR7 557 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 COL20A1Q9P218 1284 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 IGSF9Q9P2J2 1179 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 ASH2LQ9UBL3 628 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 CPNE7Q9UBL6 633 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 CHORDC1Q9UHD1 332 aaPredicted RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SH3BGRL2Q9UJC5 107 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 MOSPD1Q9UJG1 213 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 FAM184BQ9ULE4 1060 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 CLCA2Q9UQC9 943 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 DTNAQ9Y4J8 743 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 PCDHB6Q9Y5E3 794 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 CYP46A1Q9Y6A2 500 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 CDY2AQ9Y6F7 541 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 DNAH14Q0VDD8 3507 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SPATA31A5Q5VU36 1347 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 MYPNQ86TC9 1320 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SPATA31A7Q8IWB4 1347 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 HFM1A2PYH4 1435 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 PLEKHH2Q8IVE3 1493 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 HMX3A6NHT5 357 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 FAM90A27PA6NNH2 459 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 FAM25EA8MYX2 175 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 IPO8O15397 1037 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 FMO6PO60774 539 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 GJB3O75712 270 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 SLU7O95391 586 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 C4BPAP04003 597 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 ATP5BP06576 529 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 SFTPCP11686 197 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 MYL4P12829 197 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 NPR1P16066 1061 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 IFNAR1P17181 557 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 HLA-DPA1P20036 260 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 PSMA4P25789 261 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 ACSL1P33121 698 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 SSR1P43307 286 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 CCT4P50991 539 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 RAD23AP54725 363 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 EPHB4P54760 987 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 PER3P56645 1201 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 STK4Q13043 487 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 IL10RAQ13651 578 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 KCNB1Q14721 858 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 COG2Q14746 738 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 NOMO1Q15155 1222 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 ADIPOQQ15848 244 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 KYNUQ16719 465 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 ZNF674Q2M3X9 581 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 WSCD2Q2TBF2 565 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC44A4Q53GD3 710 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 HSP90AB3PQ58FF7 597 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 EMC4Q5J8M3 183 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 ARL6IP4Q66PJ3 421 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 PXKQ7Z7A4 578 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 STK32CQ86UX6 486 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 GATAD2AQ86YP4 633 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 RHOT1Q8IXI2 618 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 RNF168Q8IYW5 571 aaPredicted RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 TBC1D21Q8IYX1 336 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 SRBD1Q8N5C6 995 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 TMCO5AQ8N6Q1 288 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 ZNF540Q8NDQ6 660 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 TBC1D22AQ8WUA7 517 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 GIMAP1Q8WWP7 306 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 GAB3Q8WWW8 586 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 ASB15Q8WXK1 588 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 KAT5Q92993 513 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 NMD3Q96D46 503 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 KIF1BPQ96EK5 621 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 RNF125Q96EQ8 232 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 BICD1Q96G01 975 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 P2RX7Q99572 595 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 NOL10Q9BSC4 688 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 DNAI2Q9GZS0 605 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 TWSG1Q9GZX9 223 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 MANSC1Q9H8J5 431 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 ADPRHL2Q9NX46 363 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 KCTD5Q9NXV2 234 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 STK32BQ9NY57 414 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 PRSS50Q9UI38 385 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 SCAF8Q9UPN6 1271 aaKnown RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 USP15Q9Y4E8 981 aaPredicted RBP4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 ADAMTS13Q76LX8 1427 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 WDR87Q6ZQQ6 2873 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms