RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 BLOC1S4Q9NUP1 217 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 CACNA2D2Q9NY47 1150 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 CDH9Q9ULB4 789 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 GIT1Q9Y2X7 761 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 A0A0A6YYK5 440 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 A0A0G2JLL6 359 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 SLC9A3R1O14745 358 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 ADRB2P07550 413 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 DARSP14868 501 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 ATP6V1E1P36543 226 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ESRRGP62508 458 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ZC3H12AQ5D1E8 599 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 ZC3H12BQ5HYM0 836 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 PRRT2Q7Z6L0 340 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 STRA8Q7Z7C7 330 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 B3GALNT2Q8NCR0 500 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ZSWIM2Q8NEG5 633 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ARMC2Q8NEN0 867 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 HAS1Q92839 578 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 WWP1Q9H0M0 922 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 SCHIP1Q9P0W5 487 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 MON2Q7Z3U7 1717 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 SUPT7LO94864 414 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 PAEPP09466 180 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 SMPD1P17405 629 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 HALP42357 657 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 GUCY1A3Q02108 690 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 PRKAA1Q13131 559 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 MYBPC2Q14324 1141 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 TARBP2Q15633 366 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 CCL14Q16627 93 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 PPP2R2DQ66LE6 453 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 C11orf63Q6NUN7 778 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 FOXR1Q6PIV2 292 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 LAYNQ6UX15 382 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 NLRP14Q86W24 1093 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 IFNEQ86WN2 208 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.51□□□□□ -1.53
LRP6-203ENST00000538239 PPP1R16AQ96I34 528 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ERP44Q9BS26 406 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 FRMD8P1Q9BZ68 369 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 TRMT13Q9NUP7 481 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 RIC8BQ9NVN3 520 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 RRN3Q9NYV6 651 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 APPL1Q9UKG1 709 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 FAM32AQ9Y421 112 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 V9GYQ6 96 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 TRIM49D1C9J1S8 452 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 DYRK3O43781 588 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 TNNI3P19429 210 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 GABRR2P28476 465 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 HIRAP54198 1017 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 C1QBPQ07021 282 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 ZNF268Q14587 947 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 HSDL1Q3SXM5 330 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 FUT11Q495W5 492 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 SERPINA13PQ6UXR4 307 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 FAM183BPQ6ZVS7 135 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 SLC44A2Q8IWA5 706 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 VMP1Q96GC9 406 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ZFYVE19Q96K21 471 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 SPACA7Q96KW9 195 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 TBL1YQ9BQ87 522 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 FAM167BQ9BTA0 163 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 LRRC40Q9H9A6 602 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 AASDHPPTQ9NRN7 309 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 GRID1Q9ULK0 1009 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 SMG5Q9UPR3 1016 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 SMIM35A0A1B0GVV1 85 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 MEI4A8MW99 385 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 AGTP01019 485 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 MLNP12872 115 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 STMN1P16949 149 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 NPR3P17342 541 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 OR1D2P34982 312 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 GPC1P35052 558 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 THOP1P52888 689 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 NME5P56597 212 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 RASIP1Q5U651 963 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 PATL1Q86TB9 770 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 GLIS3Q8NEA6 775 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 B4GALNT2Q8NHY0 566 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 PIK3R5Q8WYR1 880 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ZBTB10Q96DT7 871 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 MYOCQ99972 504 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 C1QTNF7Q9BXJ2 289 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 C11orf49Q9H6J7 331 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ACTR5Q9H9F9 607 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 GOLGA2P5Q9HBQ8 144 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 DRG1Q9Y295 367 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 GPSM3Q9Y4H4 160 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 NFKBIEO00221 500 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 ZW10O43264 779 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 SKAP2O75563 359 aaPredicted RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 CSH1P0DML2 217 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CSH2P0DML3 217 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 ITGB5P18084 799 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 LAG3P18627 525 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 TCN1P20061 433 aaPredicted RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 SERPINB8P50452 374 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms