RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ZFP42Q96MM3 310 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 FUCA2Q9BTY2 467 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TRIM54Q9BYV2 358 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MED28Q9H204 178 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ACAD9Q9H845 621 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TMEM138Q9NPI0 162 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PFDN2Q9UHV9 154 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PCDHGA10Q9Y5H3 936 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SYNCRIPO60506 623 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 GP5P40197 560 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TRAP1Q12931 704 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 CCDC157Q569K6 752 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 USP17L6PQ6QN14 398 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PIGUQ9H490 435 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 GDF3Q9NR23 364 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 CHORDC1Q9UHD1 332 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TUBE1Q9UJT0 475 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 BMP10O95393 424 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 RPS7P62081 194 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 UBAP2LQ14157 1087 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ACSF2Q96CM8 615 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ACAT2Q9BWD1 397 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SNX7Q9UNH6 387 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 CCT8P50990 548 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 BST2Q10589 180 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PDK1Q15118 436 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 DNAJC14Q6Y2X3 702 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 DENND5BQ6ZUT9 1274 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 OR6B3Q8NGW1 331 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 LRRC7Q96NW7 1537 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 NCKAP5LQ9HCH0 1330 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PRLRP16471 622 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SCRN3Q0VDG4 424 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 CCNIQ14094 377 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TYW3Q6IPR3 259 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MB21D2Q8IYB1 491 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ATPAF2Q8N5M1 289 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ENGASEQ8NFI3 743 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TPD52L3Q96J77 140 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 RPS6KL1Q9Y6S9 549 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PPLO60437 1756 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 LOC110117498-PIK3R3F6TDL0 507 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TTKP33981 857 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PPP3CCP48454 512 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MAPKAPK2P49137 400 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MADCAM1Q13477 382 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PIGHQ14442 188 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 USP49Q70CQ1 688 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 CCDC36Q8IYA8 594 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 GALNT6Q8NCL4 622 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 GPAMQ9HCL2 828 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 KCNK4Q9NYG8 393 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ERAP1Q9NZ08 941 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 COMMD9Q9P000 198 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PIK3CDO00329 1044 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 NMT2O60551 498 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 RRP1BQ14684 758 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 NGLY1Q96IV0 654 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 RNF145Q96MT1 663 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TLR10Q9BXR5 811 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 DCLK3Q9C098 648 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 hCG_1984214I3L0E3 225 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 STAT5AP42229 794 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 NT5C2P49902 561 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 STAT5BP51692 787 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 RPS8P62241 208 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 DPYSQ14117 519 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PID1Q7Z2X4 250 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 C8orf59Q8N0T1 100 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF713Q8N859 430 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 VPS33BQ9H267 617 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 CPVLQ9H3G5 476 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PIH1D3Q9NQM4 214 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SF3B1O75533 1304 aaKnown RBP eCLIP5.81□□□□□ -1.481e-7■■■■■ 172.3
CSMD1-215ENST00000537824 RIPK2O43353 540 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ETFBP38117 255 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TPI1P60174 286 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 CACHD1Q5VU97 1274 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 BHLHB9Q6PI77 547 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ZHX1-C8orf76Q96EF9 292 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 GREM2Q9H772 168 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 WDR41Q9HAD4 459 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ZFYVE28Q9HCC9 887 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ARL8BQ9NVJ2 186 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MCUBQ9NWR8 336 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ANAPC2Q9UJX6 822 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MRC2Q9UBG0 1479 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 UBAP1LF5GYI3 381 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MAP3K13O43283 966 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MT-CO1P00395 513 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SERPINE1P05121 402 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MAGEA2P43356 314 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SLC25A3Q00325 362 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 BMPR2Q13873 1038 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PARP6Q2NL67 630 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 LIN52Q52LA3 116 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 DENND1BQ6P3S1 775 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SATL1Q86VE3 508 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PEX5LQ8IYB4 626 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MYDGFQ969H8 173 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms