RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 GTPBP2Q9BX10 602 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SLC6A17Q9H1V8 727 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CAPN10Q9HC96 672 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 DMXL2Q8TDJ6 3036 aa20.62■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PKD1L2Q7Z442 2459 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SLC12A8A0AV02 714 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SLC16A3O15427 465 aaKnown RBP20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ZBED1O96006 694 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ZNF132P52740 706 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 GEN1Q17RS7 908 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 GOLGA7BQ2TAP0 167 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CBWD6Q4V339 395 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CBWD3Q5JTY5 395 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CBWD5Q5RIA9 395 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ZNF658Q5TYW1 1059 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PM20D1Q6GTS8 502 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CPXM2Q8N436 756 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 HDDC3Q8N4P3 179 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ZNF419Q96HQ0 510 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 FSCN3Q9NQT6 498 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 THAP10Q9P2Z0 257 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 COQ4Q9Y3A0 265 aa20.61■□□□□ 0.89
TNFRSF1B-204ENST00000536782 XPO1O14980 1071 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PROS1P07225 676 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 BCAT1P54687 386 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 YWHAEP62258 255 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 FKBP3Q00688 224 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SEMA3BQ13214 749 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CUL2Q13617 745 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 E2F5Q15329 346 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 FUT11Q495W5 492 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 COBLL1Q53SF7 1204 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SGO2Q562F6 1265 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SYCP2LQ5T4T6 812 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ANKS1BQ7Z6G8 1248 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 METTL3Q86U44 580 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 RGL4Q8IZJ4 473 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 FOXJ1Q92949 421 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PLD4Q96BZ4 506 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PIWIL1Q96J94 861 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 GSDMAQ96QA5 445 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ULBP1Q9BZM6 244 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PRDM16Q9HAZ2 1276 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 LRRC4Q9HBW1 653 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CD93Q9NPY3 652 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 OLA1Q9NTK5 396 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 HESX1Q9UBX0 185 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 TSPAN16Q9UKR8 245 aa20.6■□□□□ 0.89
TNFRSF1B-204ENST00000536782 UPK3BL1B0FP48 263 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 UPK3BL2E5RIL1 263 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ARHGAP33O14559 1287 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 OPHN1O60890 802 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 TOP3BO95985 862 aaKnown RBP20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SYPP08247 313 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CD6P30203 668 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 IL12RB1P42701 662 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PDE4CQ08493 712 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ENPP2Q13822 863 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 UNQ6494/PRO21346Q6UXR6 183 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 PIP4P1Q86T03 277 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 FMR1NBQ8N0W7 255 aaPredicted RBP20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 DDI1Q8WTU0 396 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 TMEM121BQ9BXQ6 578 aaPredicted RBP20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SLC2A11Q9BYW1 496 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SUSD2Q9UGT4 822 aa20.59■□□□□ 0.89
TNFRSF1B-204ENST00000536782 DSPP15924 2871 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 KNL1Q8NG31 2342 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 GOLGA6L4A6NEF3 574 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 C1QTNF9BB2RNN3 333 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 TULP2O00295 520 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SYNCRIPO60506 623 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SMC2O95347 1197 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 C1QTNF9P0C862 333 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CD19P15391 556 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 SPINK2P20155 84 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 HARS2P49590 506 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 BST2Q10589 180 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 EIF4HQ15056 248 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 TRIP4Q15650 581 aaPredicted RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 WDR45BQ5MNZ6 344 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ANKRD40Q6AI12 368 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 FMNL3Q8IVF7 1028 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 FAM217AQ8IXS0 508 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ZC3H3Q8IXZ2 948 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 MINDY1Q8N5J2 469 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 RNF139Q8WU17 664 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 NDRG1Q92597 394 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 IPO9Q96P70 1041 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 MKRN2Q9H000 416 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ELOVL2Q9NXB9 296 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 ARMCX3Q9UH62 379 aaPredicted RBP20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 CLEC4EQ9ULY5 219 aa20.58■□□□□ 0.89
TNFRSF1B-204ENST00000536782 VDRP11473 427 aa20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 GNSP15586 552 aa20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 PMS1P54277 932 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 LRRC63Q05C16 580 aa20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ADIGQ0VDE8 80 aa20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 PLEKHG6Q3KR16 790 aa20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 MPPE1Q53F39 396 aa20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SCNM1Q9BWG6 230 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms