RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ADCY6O43306 1168 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 TM7SF2O76062 418 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 LGALS2P05162 132 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 RAP1GAPP47736 663 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 ENTPD1P49961 510 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 LDLRAD1Q5T700 205 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 IZUMO3Q5VZ72 239 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 BBS5Q8N3I7 341 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 CD101Q93033 1021 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 SKA1Q96BD8 255 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 EURLQ9NYK6 297 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 EVPLQ92817 2033 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 ACKR2O00590 384 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 FAM189A1O60320 539 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 MTA2O94776 668 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 CD19P15391 556 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 ARHGAP1Q07960 439 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 TFDP1Q14186 410 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 KRT81Q14533 505 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 PDCD4Q53EL6 469 aaKnown RBP14.45□□□□□ -0.1
LIG1-203ENST00000536218 MAP3K21Q5TCX8 1036 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 MPZL3Q6UWV2 235 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 DPH6Q7L8W6 267 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 CFAP57Q96MR6 1250 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 CISHQ9NSE2 258 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 KLHL11Q9NVR0 708 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 CPSF3Q9UKF6 684 aaKnown RBP14.45□□□□□ -0.1
LIG1-203ENST00000536218 POLIQ9UNA4 740 aa14.45□□□□□ -0.1
LIG1-203ENST00000536218 IGKV6-21A0A0C4DH24 114 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 KANSL1LA0AUZ9 987 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 ASS1P00966 412 aaKnown RBP14.44□□□□□ -0.1
LIG1-203ENST00000536218 TBXAS1P24557 533 aaPredicted RBP14.44□□□□□ -0.1
LIG1-203ENST00000536218 VCPP55072 806 aaKnown RBP14.44□□□□□ -0.1
LIG1-203ENST00000536218 CDH8P55286 799 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 NOMO3P69849 1222 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 CCNA1P78396 465 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 ZNF200P98182 395 aaPredicted RBP14.44□□□□□ -0.1
LIG1-203ENST00000536218 SIX1Q15475 284 aaPredicted RBP14.44□□□□□ -0.1
LIG1-203ENST00000536218 CYP1B1Q16678 543 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 ZNF699Q32M78 642 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 LIN9Q5TKA1 542 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 TMEM214Q6NUQ4 689 aaKnown RBP14.44□□□□□ -0.1
LIG1-203ENST00000536218 WDR49Q8IV35 697 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 GSDMBQ8TAX9 411 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 AGAP3Q96P47 875 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 C2orf40Q9H1Z8 148 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 SLC17A7Q9P2U7 560 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 GPR25O00155 361 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 FKBP6O75344 327 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 HDAC4P56524 1084 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 KRT72Q14CN4 511 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 TLR1Q15399 786 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 ANKDD1AQ495B1 522 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 Q6ZNX1 250 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 GSTA5Q7RTV2 222 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 TCP10LQ8TDR4 215 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 TTC17Q96AE7 1141 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 ARHGEF4Q9NR80 690 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 RBMX2Q9Y388 322 aaKnown RBP14.44□□□□□ -0.1
LIG1-203ENST00000536218 TLR3O15455 904 aaKnown RBP14.44□□□□□ -0.1
LIG1-203ENST00000536218 TAPT1Q6NXT6 567 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 TMC7Q7Z402 723 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 ZNF677Q86XU0 584 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 SLC7A5P1Q8MH63 180 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 CDT1Q9H211 546 aa14.44□□□□□ -0.1
LIG1-203ENST00000536218 RPF1Q9H9Y2 349 aaKnown RBP14.44□□□□□ -0.1
LIG1-203ENST00000536218 SH3PXD2BA1X283 911 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 BIRC5O15392 142 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 FOXD2O60548 495 aaPredicted RBP14.43□□□□□ -0.1
LIG1-203ENST00000536218 OXSR1O95747 527 aaPredicted RBP14.43□□□□□ -0.1
LIG1-203ENST00000536218 TNNC2P02585 160 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 HOXC6P09630 235 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 IVDP26440 423 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 GCAP28676 217 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 ALDH18A1P54886 795 aaKnown RBP14.43□□□□□ -0.1
LIG1-203ENST00000536218 RPL7AP62424 266 aaKnown RBP14.43□□□□□ -0.1
LIG1-203ENST00000536218 CENPCQ03188 943 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 TMCO4Q5TGY1 634 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 RNF111Q6ZNA4 994 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 MON1BQ7L1V2 547 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 PRPF39Q86UA1 669 aaKnown RBP14.43□□□□□ -0.1
LIG1-203ENST00000536218 BRI3BPQ8WY22 251 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 LRRC19Q9H756 370 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 ZDHHC7Q9NXF8 308 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.43□□□□□ -0.1
LIG1-203ENST00000536218 AK5Q9Y6K8 562 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 CBFA2T3O75081 653 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 C22orf31O95567 290 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 KITP10721 976 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 MBTD1Q05BQ5 628 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 GK3PQ14409 553 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 FASTKD3Q14CZ7 662 aaKnown RBP14.43□□□□□ -0.1
LIG1-203ENST00000536218 TCEAL1Q15170 157 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 ATP13A4Q4VNC1 1196 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 EFCAB3Q8N7B9 438 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 RNF169Q8NCN4 708 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 PPP4R1Q8TF05 950 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 NLRP7Q8WX94 980 aa14.43□□□□□ -0.1
LIG1-203ENST00000536218 HNRNPABQ99729 332 aaKnown RBP14.43□□□□□ -0.1
LIG1-203ENST00000536218 FZD8Q9H461 694 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms