RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 CACNA2D2Q9NY47 1150 aa16.93■□□□□ 0.3
CLSTN3-204ENST00000535313 C4orf47A7E2U8 309 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 NPC1O15118 1278 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 GADD45BO75293 160 aaPredicted RBP16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 LCP1P13796 627 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 PTGER3P43115 390 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 MFAP3P55082 362 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 STX17P56962 302 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 RPL6Q02878 288 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 PAK1Q13153 545 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 STARD3Q14849 445 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 E2F5Q15329 346 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 TRIP4Q15650 581 aaPredicted RBP16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 CNGA2Q16280 664 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 PKDCCQ504Y2 493 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 KIAA1211LQ6NV74 962 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 SYT12Q8IV01 421 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 TFAP2BQ92481 460 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 EDEM1Q92611 657 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 ERLEC1Q96DZ1 483 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 P2RY11Q96G91 374 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 NUSAP1Q9BXS6 441 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 TMEM9BQ9NQ34 198 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 ABCC13Q9NSE7 274 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 SFMBT1Q9UHJ3 866 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 EVLQ9UI08 416 aaPredicted RBP16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 HBS1LQ9Y450 684 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 RAD54BQ9Y620 910 aa16.92■□□□□ 0.3
CLSTN3-204ENST00000535313 YJEFN3A6XGL0 299 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 PATE3B3GLJ2 98 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 E7ENQ6 273 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 M0QYV0 167 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 FGFR1OPO95684 399 aaKnown RBP16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 NDUFV2P19404 249 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 RGS7P49802 495 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 IRX4P78413 519 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 KCNH2Q12809 1159 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 LMAN2Q12907 356 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 TRIM61Q5EBN2 209 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 RRAGAQ7L523 313 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 ANKS1BQ7Z6G8 1248 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 FAM217AQ8IXS0 508 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 SCML4Q8N228 414 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 RBBP8NLQ8NC74 664 aaPredicted RBP16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 LMO3Q8TAP4 145 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 GOLGA1Q92805 767 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 KAT5Q92993 513 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 SLC2A11Q9BYW1 496 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 STON1Q9Y6Q2 735 aa16.91■□□□□ 0.3
CLSTN3-204ENST00000535313 WASH3PC4AMC7 463 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 RNF225M0QZC1 329 aaPredicted RBP16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 AFPP02771 609 aaKnown RBP16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 BRD2P25440 801 aaKnown RBP16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 HOXD12P35452 270 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 DAOAP59103 153 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 ZNF445P59923 1031 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 GCNT1Q02742 428 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 GEN1Q17RS7 908 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 MPPE1Q53F39 396 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 PMF1Q6P1K2 205 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 KIAA1324Q6UXG2 1013 aaKnown RBP16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 TRIM59Q8IWR1 403 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 EHBP1Q8NDI1 1231 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 IRGQQ8WZA9 623 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 HSFY1Q96LI6 401 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 CNTNAP3BQ96NU0 1288 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 SRRTQ9BXP5 876 aaKnown RBP16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 CNTNAP3Q9BZ76 1288 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 CD248Q9HCU0 757 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 THAP10Q9P2Z0 257 aaPredicted RBP16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 CYP8B1Q9UNU6 501 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 PLXND1Q9Y4D7 1925 aa16.9■□□□□ 0.3
CLSTN3-204ENST00000535313 IGHV1OR15-9A0A0B4J2B8 117 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 TIMM44O43615 452 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 SYNCRIPO60506 623 aaKnown RBP16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 FBXO21O94952 628 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 KCNK5O95279 499 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 LATS1O95835 1130 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 ITPKAP23677 461 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 ZNF132P52740 706 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 MARSP56192 900 aaKnown RBP16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 ARID5AQ03989 594 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 EIF4HQ15056 248 aaKnown RBP16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 ADGRF1Q5T601 910 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 N4BP2L1Q5TBK1 243 aaPredicted RBP16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 ARHGEF19Q8IW93 802 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 DEFB119Q8N690 84 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 TRIML1Q8N9V2 468 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 CEP76Q8TAP6 659 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 PIWIL1Q96J94 861 aaKnown RBP16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 MRGPRX1Q96LB2 322 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 ZSWIM1Q9BR11 485 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 CIPCQ9C0C6 399 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 TMEM74BQ9NUR3 256 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 ELOVL2Q9NXB9 296 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 PILRBQ9UKJ0 227 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 CLEC4EQ9ULY5 219 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms