RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 TBC1D23Q9NUY8 699 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 ZNF212Q9UDV6 495 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 PCDHA12Q9UN75 941 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 COL15A1P39059 1388 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 C4orf47A7E2U8 309 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 TLX3O43711 291 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-205ENST00000533776 ZC3H11AO75152 810 aaKnown RBP eCLIP3.49□□□□□ -1.85
BRCA2-205ENST00000533776 NGFRP08138 427 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 MYF5P13349 255 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 PLA2G2AP14555 144 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 PBX1P40424 430 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 ZXDBP98169 803 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 POLD3Q15054 466 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-205ENST00000533776 INPP5JQ15735 1006 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-205ENST00000533776 MINDY4Q4G0A6 757 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 AASDHQ4L235 1098 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-205ENST00000533776 CCDC149Q6ZUS6 474 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 ADHFE1Q8IWW8 467 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 UEVLDQ8IX04 471 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 RAVER1Q8IY67 606 aaKnown RBP3.49□□□□□ -1.85
BRCA2-205ENST00000533776 KRT78Q8N1N4 520 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 SLC44A5Q8NCS7 719 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 FAM156AQ8NDB6 213 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 MBD3L2Q8NHZ7 208 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-205ENST00000533776 BCAS4Q8TDM0 211 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 ZDHHC12Q96GR4 267 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 APIPQ96GX9 242 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 SLC25A32Q9H2D1 315 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 PAPOLBQ9NRJ5 636 aaKnown RBP3.49□□□□□ -1.85
BRCA2-205ENST00000533776 ABHD10Q9NUJ1 306 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 ASNSD1Q9NWL6 643 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 ANAPC4Q9UJX5 808 aa3.49□□□□□ -1.85
BRCA2-205ENST00000533776 TRBV5-3A0A0A0MS03 114 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 SLC28A2O43868 658 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 MGEA5O60502 916 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 MT-ND5P03915 603 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 SLC3A2P08195 630 aaKnown RBP3.48□□□□□ -1.85
BRCA2-205ENST00000533776 U2AF1L5P0DN76 240 aaPredicted RBP3.48□□□□□ -1.85
BRCA2-205ENST00000533776 TFEBP19484 476 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 U2AF1Q01081 240 aaKnown RBP eCLIP3.48□□□□□ -1.85
BRCA2-205ENST00000533776 FHL3Q13643 280 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 PTGR1Q14914 329 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 PPP4R4Q6NUP7 873 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 C18orf65Q6ZTR6 163 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 SUN3Q8TAQ9 357 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 CELF1Q92879 486 aaKnown RBP3.48□□□□□ -1.85
BRCA2-205ENST00000533776 SNX22Q96L94 193 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 SENP7Q9BQF6 1050 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 TMEM204Q9BSN7 226 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 RGS17Q9UGC6 210 aaPredicted RBP3.48□□□□□ -1.85
BRCA2-205ENST00000533776 DDX20Q9UHI6 824 aaKnown RBP3.48□□□□□ -1.85
BRCA2-205ENST00000533776 CAPN11Q9UMQ6 739 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 ICKQ9UPZ9 632 aa3.48□□□□□ -1.85
BRCA2-205ENST00000533776 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.47□□□□□ -1.85
BRCA2-205ENST00000533776 A0A0G2JK05 382 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 PRYO14603 147 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 SCGB1D2O95969 90 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 HOXB2P14652 356 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 DRD1P21728 446 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 PEX2P28328 305 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 NDUFS1P28331 727 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 DGKQP52824 942 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 P2RX3P56373 397 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 GAB1Q13480 694 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 BFSP2Q13515 415 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 ACOX1Q15067 660 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 KIAA0753Q2KHM9 967 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 ODR4Q5SWX8 454 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 FAM102BQ5T8I3 360 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 NUGGCQ68CJ6 796 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 DARS2Q6PI48 645 aaKnown RBP3.47□□□□□ -1.85
BRCA2-205ENST00000533776 Q6ZTC4 211 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 DCP1BQ8IZD4 617 aaKnown RBP3.47□□□□□ -1.85
BRCA2-205ENST00000533776 AKAP1Q92667 903 aaKnown RBP eCLIP3.47□□□□□ -1.85
BRCA2-205ENST00000533776 P2RY11Q96G91 374 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 FAM227BQ96M60 508 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 THSD1Q9NS62 852 aa3.47□□□□□ -1.85
BRCA2-205ENST00000533776 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 TTC34A8MYJ7 566 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 DUSP1P28562 367 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 TNFRSF8P28908 595 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 IGHMBP2P38935 993 aaKnown RBP3.46□□□□□ -1.86
BRCA2-205ENST00000533776 SOX2P48431 317 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 PGGT1BP53609 377 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 GPS1Q13098 491 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 ASIC2Q16515 512 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 SMTNL2Q2TAL5 461 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 PLEKHG6Q3KR16 790 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 RRAGBQ5VZM2 374 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 TRAPPC11Q7Z392 1133 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 RFX6Q8HWS3 928 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 FBXL14Q8N1E6 418 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 MSI2Q96DH6 328 aaKnown RBP3.46□□□□□ -1.86
BRCA2-205ENST00000533776 TTLL2Q9BWV7 592 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 GATA5Q9BWX5 397 aaPredicted RBP3.46□□□□□ -1.86
BRCA2-205ENST00000533776 RNF26Q9BY78 433 aaPredicted RBP3.46□□□□□ -1.86
BRCA2-205ENST00000533776 RBM38Q9H0Z9 239 aaKnown RBP3.46□□□□□ -1.86
BRCA2-205ENST00000533776 MYLK2Q9H1R3 596 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 AAMDCQ9H7C9 122 aa3.46□□□□□ -1.86
BRCA2-205ENST00000533776 HEYLQ9NQ87 328 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms