RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ADRB1P08588 477 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 GSTA2P09210 222 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 ATP2A2P16615 1042 aaKnown RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 RPL22P35268 128 aaKnown RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 AIF1P55008 147 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 SLC8A3P57103 927 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 ZXDAP98168 799 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 PURAQ00577 322 aaKnown RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 ROR1Q01973 937 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 PDE4CQ08493 712 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 FSCN1Q16658 493 aaKnown RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 KLHL38Q2WGJ6 581 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 TRNP1Q6NT89 227 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 VSTM1Q6UX27 236 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 RGS9BPQ6ZS82 235 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 PIGWQ7Z7B1 504 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 CPLX4Q7Z7G2 160 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 RNF180Q86T96 592 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 RSPH3Q86UC2 560 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 TMEM86AQ8N2M4 240 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 ANKS4BQ8N8V4 417 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 GLIS1Q8NBF1 620 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 PCSK9Q8NBP7 692 aaKnown RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 OR6B3Q8NGW1 331 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 KBTBD7Q8WVZ9 684 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 CPT1BQ92523 772 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 LRRC39Q96DD0 335 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 SEC16BQ96JE7 1060 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 PEBP4Q96S96 227 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 MTG1Q9BT17 334 aaPredicted RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 TMEM121Q9BTD3 319 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 SNX25Q9H3E2 840 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 NXF3Q9H4D5 531 aaKnown RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 CDHR5Q9HBB8 845 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 PCDH18Q9HCL0 1135 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 XPNPEP3Q9NQH7 507 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.04□□□□□ -0.8
CHKA-207ENST00000533728 SMG5Q9UPR3 1016 aaKnown RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 NAALADL1Q9UQQ1 740 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 PIN4Q9Y237 131 aaKnown RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 NME7Q9Y5B8 376 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 ANKRD17O75179 2603 aaKnown RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 FNDC1Q4ZHG4 1894 aaPredicted RBP10.04□□□□□ -0.8
CHKA-207ENST00000533728 NLRC5Q86WI3 1866 aa10.04□□□□□ -0.8
CHKA-207ENST00000533728 SF3B1O75533 1304 aaKnown RBP eCLIP10.04□□□□□ -0.8
CHKA-207ENST00000533728 MYO7AQ13402 2215 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 EXOC1LA0A1B0GW35 172 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 TMEM120BA0PK00 339 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 HACD1B0YJ81 288 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 M0QZ92 97 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 GABRDO14764 452 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 TREHO43280 583 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 HUS1O60921 280 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 CABYRO75952 493 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 MYL3P08590 195 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 SLCO1A2P46721 670 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 ZNF135P52742 658 aaPredicted RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 MRPS6P82932 125 aaKnown RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 RNASELQ05823 741 aaKnown RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 ORC1Q13415 861 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 KRT81Q14533 505 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 KCNJ11Q14654 390 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 SMTNL2Q2TAL5 461 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 LACTB2Q53H82 288 aaPredicted RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 ANKRD20A8PQ5CZ79 823 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 KCNT1Q5JUK3 1230 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 BZW1Q7L1Q6 419 aaKnown RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 TRABD2AQ86V40 505 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 CDKL3Q8IVW4 592 aaPredicted RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 PDIK1LQ8N165 341 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 OTUD6BQ8N6M0 293 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 C12orf29Q8N999 325 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 SLC43A3Q8NBI5 491 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 CCDC197Q8NCU1 140 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 SMG8Q8ND04 991 aaKnown RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 MCUQ8NE86 351 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 MDM1Q8TC05 714 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 FAM172AQ8WUF8 416 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 CKAP2Q8WWK9 683 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 HSPH1Q92598 858 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 APBB2Q92870 758 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 C18orf25Q96B23 403 aaPredicted RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 ALKBH8Q96BT7 664 aaKnown RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 GRAMD1AQ96CP6 724 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 C9orf72Q96LT7 481 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 MAGEB18Q96M61 343 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 PPP1R10Q96QC0 940 aaKnown RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 DHRS4Q9BTZ2 278 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 CALN1Q9BXU9 219 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 TANC1Q9C0D5 1861 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 RASSF4Q9H2L5 321 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 KDM4CQ9H3R0 1056 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 ACSS3Q9H6R3 686 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 SPC25Q9HBM1 224 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 PNPLA8Q9NP80 782 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 TMEM51Q9NW97 253 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 PSMC3IPQ9P2W1 217 aaPredicted RBP10.03□□□□□ -0.8
CHKA-207ENST00000533728 PCSK1NQ9UHG2 260 aa10.03□□□□□ -0.8
CHKA-207ENST00000533728 IPPQ9Y573 584 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms