RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 IGSF9Q9P2J2 1179 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 INTUQ9ULD6 942 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 REXO2Q9Y3B8 237 aaKnown RBP18.17■□□□□ 0.5
NXF1-216ENST00000533499 WNT6Q9Y6F9 365 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 ANHXE9PGG2 379 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 PSMC3P17980 439 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 WEE1P30291 646 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 CORO1AP31146 461 aaKnown RBP18.16■□□□□ 0.5
NXF1-216ENST00000533499 VAV2P52735 878 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 ATXN1P54253 815 aaKnown RBP18.16■□□□□ 0.5
NXF1-216ENST00000533499 OGDHQ02218 1023 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 USP4Q13107 963 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 ARCQ7LC44 396 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 MFSD6LQ8IWD5 586 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 TXLNBQ8N3L3 684 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 RIN3Q8TB24 985 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 ADAMTS19Q8TE59 1207 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 PPP1R9BQ96SB3 815 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 CNPY3Q9BT09 278 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 TRMT61BQ9BVS5 477 aaKnown RBP18.16■□□□□ 0.5
NXF1-216ENST00000533499 DCLK3Q9C098 648 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 BRD9Q9H8M2 597 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 OSGEPQ9NPF4 335 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 PIGVQ9NUD9 493 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 DUS2Q9NX74 493 aaKnown RBP18.16■□□□□ 0.5
NXF1-216ENST00000533499 UVRAGQ9P2Y5 699 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 TLR6Q9Y2C9 796 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 SPTBN5Q9NRC6 3674 aaKnown RBP18.16■□□□□ 0.5
NXF1-216ENST00000533499 COL6A3P12111 3177 aa18.16■□□□□ 0.5
NXF1-216ENST00000533499 MYO1FO00160 1098 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 F9P00740 461 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 RDXP35241 583 aaKnown RBP18.15■□□□□ 0.5
NXF1-216ENST00000533499 PTPN9P43378 593 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 MESDQ14696 234 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 RAB6CQ53S08 254 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 OTUD1Q5VV17 481 aaPredicted RBP18.15■□□□□ 0.5
NXF1-216ENST00000533499 NUGGCQ68CJ6 796 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 FAM131BQ86XD5 332 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 UNC45BQ8IWX7 931 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 BBS7Q8IWZ6 715 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 RHOT2Q8IXI1 618 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 GJD3Q8N144 294 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 TTC8Q8TAM2 541 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 DEPDC1BQ8WUY9 529 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 RFFLQ8WZ73 363 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 FCRL2Q96LA5 508 aaPredicted RBP18.15■□□□□ 0.5
NXF1-216ENST00000533499 ADAM33Q9BZ11 813 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 RAB6CQ9H0N0 254 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 WDCPQ9H6R7 721 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 OBP2AQ9NY56 170 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 IP6K2Q9UHH9 426 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 SLC12A6Q9UHW9 1150 aa18.15■□□□□ 0.5
NXF1-216ENST00000533499 XIRP2A4UGR9 3374 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 E2F8A0AVK6 867 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 RCCD1A6NED2 376 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 SLC9A3R1O14745 358 aaPredicted RBP18.14■□□□□ 0.49
NXF1-216ENST00000533499 RNF8O76064 485 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 CCDC175P0C221 793 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 SLC2A3P11169 496 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 CCR1P32246 355 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 KIF5AQ12840 1032 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 ARHGAP29Q52LW3 1261 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 TRIM68Q6AZZ1 485 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 SLC44A3Q8N4M1 653 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 ATP6V0D2Q8N8Y2 350 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 NXPE3Q969Y0 559 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 LINC00597Q9H2U6 94 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 KCNF1Q9H3M0 494 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.14■□□□□ 0.49
NXF1-216ENST00000533499 CALCOCO1Q9P1Z2 691 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 PAXBP1Q9Y5B6 917 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 ADGRG1Q9Y653 693 aa18.14■□□□□ 0.49
NXF1-216ENST00000533499 TRDMT1O14717 391 aaKnown RBP18.13■□□□□ 0.49
NXF1-216ENST00000533499 BUB1O43683 1085 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 IGLV3-25P01717 112 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 KLKB1P03952 638 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 GJC1P36383 396 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 SLC11A2P49281 568 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 VCPP55072 806 aaKnown RBP18.13■□□□□ 0.49
NXF1-216ENST00000533499 NNTQ13423 1086 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 TDGQ13569 410 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 DAB2IPQ5VWQ8 1189 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 RNF135Q8IUD6 432 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 NT5C3BQ969T7 300 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 LACRTQ9GZZ8 138 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 TKTL2Q9H0I9 626 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 SIK2Q9H0K1 926 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 EBF3Q9H4W6 596 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 TBC1D14Q9P2M4 693 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 PCSK1NQ9UHG2 260 aa18.13■□□□□ 0.49
NXF1-216ENST00000533499 AGO1Q9UL18 857 aaKnown RBP18.13■□□□□ 0.49
NXF1-216ENST00000533499 A0A0U1RQJ8 604 aa18.12■□□□□ 0.49
NXF1-216ENST00000533499 GOLGA6L7A0A1B0GV03 622 aa18.12■□□□□ 0.49
NXF1-216ENST00000533499 MACROD2A1Z1Q3 448 aa18.12■□□□□ 0.49
NXF1-216ENST00000533499 C19orf67A6NJJ6 358 aa18.12■□□□□ 0.49
NXF1-216ENST00000533499 NARSO43776 548 aaKnown RBP18.12■□□□□ 0.49
NXF1-216ENST00000533499 TSPAN3O60637 253 aa18.12■□□□□ 0.49
NXF1-216ENST00000533499 TNNT1P13805 278 aa18.12■□□□□ 0.49
NXF1-216ENST00000533499 ARSAP15289 507 aa18.12■□□□□ 0.49
NXF1-216ENST00000533499 TCF3P15923 654 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms