RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 CT47A1Q5JQC4 288 aaPredicted RBP11.84□□□□□ -0.51
CLCF1-202ENST00000533438 SPDYCQ5MJ68 293 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 LPCAT2Q7L5N7 544 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 CYP2U1Q7Z449 544 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 CPXM2Q8N436 756 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 KCTD13Q8WZ19 329 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 NDRG1Q92597 394 aaKnown RBP11.84□□□□□ -0.51
CLCF1-202ENST00000533438 BHMTQ93088 406 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 PLD4Q96BZ4 506 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 EDEM2Q9BV94 578 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 TSPY26PQ9H489 355 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 OLA1Q9NTK5 396 aaKnown RBP11.84□□□□□ -0.51
CLCF1-202ENST00000533438 MARCH2Q9P0N8 246 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 HESX1Q9UBX0 185 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 KIAA1257Q9ULG3 409 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 PI4KAP42356 2102 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 CKAP5Q14008 2032 aa11.84□□□□□ -0.51
CLCF1-202ENST00000533438 MUC22E2RYF6 1773 aaPredicted RBP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 SLC12A8A0AV02 714 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 PATE3B3GLJ2 98 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 RNF225M0QZC1 329 aaPredicted RBP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 GFRA2O00451 464 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 GABBR2O75899 941 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 PROS1P07225 676 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 SETSIPP0DME0 302 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 CD19P15391 556 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 PTGER3P43115 390 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 DHPSP49366 369 aaPredicted RBP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 MFAP3P55082 362 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 MARSP56192 900 aaKnown RBP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 ADIGQ0VDE8 80 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 TRIP4Q15650 581 aaPredicted RBP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 CCDC40Q4G0X9 1142 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 PEAR1Q5VY43 1037 aaPredicted RBP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 RNF43Q68DV7 783 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 KLHL10Q6JEL2 608 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 KIAA1211LQ6NV74 962 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 TMEM270Q6UE05 265 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 LCLAT1Q6UWP7 414 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 RSRC2Q7L4I2 434 aaKnown RBP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 DENND1CQ8IV53 801 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 TRIM59Q8IWR1 403 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 TMEFF1Q8IYR6 380 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 CHPFQ8IZ52 775 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 PGBD3Q8N328 593 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 KDF1Q8NAX2 398 aaPredicted RBP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 UBA3Q8TBC4 463 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 IPO4Q8TEX9 1081 aaKnown RBP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 NELFBQ8WX92 580 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 TFAP2BQ92481 460 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 KAT5Q92993 513 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 NT5C1BQ96P26 610 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 ZSWIM1Q9BR11 485 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 LRRC4Q9HBW1 653 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 CALCOCO1Q9P1Z2 691 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 EVLQ9UI08 416 aaPredicted RBP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 DACH1Q9UI36 760 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 STRIP2Q9ULQ0 834 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLCF1-202ENST00000533438 ADAMTS9Q9P2N4 1935 aa11.83□□□□□ -0.52
CLCF1-202ENST00000533438 IGHV1OR15-9A0A0B4J2B8 117 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 BICDL2A1A5D9 508 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 YJEFN3A6XGL0 299 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 WASH3PC4AMC7 463 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 E7ENQ6 273 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 CDX4O14627 284 aaPredicted RBP11.82□□□□□ -0.52
CLCF1-202ENST00000533438 KHNYNO15037 678 aaKnown RBP11.82□□□□□ -0.52
CLCF1-202ENST00000533438 KCNK5O95279 499 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 NDUFV2P19404 249 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 DAOAP59103 153 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 IRX4P78413 519 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 ENPP2Q13822 863 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 CNGA2Q16280 664 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 GEN1Q17RS7 908 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 ANO6Q4KMQ2 910 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 BSPRYQ5W0U4 402 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 PMF1Q6P1K2 205 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 C11orf57Q6ZUT1 292 aaPredicted RBP11.82□□□□□ -0.52
CLCF1-202ENST00000533438 FMNL3Q8IVF7 1028 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 PPM1KQ8N3J5 372 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 RBBP8NLQ8NC74 664 aaPredicted RBP11.82□□□□□ -0.52
CLCF1-202ENST00000533438 SLC35F5Q8WV83 523 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 PIGKQ92643 395 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 PIWIL1Q96J94 861 aaKnown RBP11.82□□□□□ -0.52
CLCF1-202ENST00000533438 BPIFA3Q9BQP9 254 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 CNGB3Q9NQW8 809 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 ABCC13Q9NSE7 274 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 TMEM74BQ9NUR3 256 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 CACNA2D2Q9NY47 1150 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 SFMBT1Q9UHJ3 866 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 STOML2Q9UJZ1 356 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 CLEC4EQ9ULY5 219 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 CTNND2Q9UQB3 1225 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 HBS1LQ9Y450 684 aaKnown RBP11.82□□□□□ -0.52
CLCF1-202ENST00000533438 PCDHB4Q9Y5E5 795 aa11.82□□□□□ -0.52
CLCF1-202ENST00000533438 PCDH15Q96QU1 1955 aa11.81□□□□□ -0.52
CLCF1-202ENST00000533438 CNOT1A5YKK6 2376 aaKnown RBP11.81□□□□□ -0.52
CLCF1-202ENST00000533438 C4orf47A7E2U8 309 aa11.81□□□□□ -0.52
CLCF1-202ENST00000533438 NPC1O15118 1278 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms