RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 SMARCA4P51532 1647 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 C1orf232A0A0U1RR37 186 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 LCHNA4D1U4 455 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 TCAF2A6NFQ2 919 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 LRRC72A6NJI9 287 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 ANKRD65E5RJM6 399 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 NPIPB6E9PJ23 425 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 K7ENM7 598 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 NFIBO00712 420 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 NEMP1O14524 444 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 IFIT3O14879 490 aaKnown RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 ARHGAP6O43182 974 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 RASA4O43374 803 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 TGM5O43548 720 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 STX10O60499 249 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 GAS7O60861 476 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 CUTAO60888 179 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 PALMO75781 387 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 SNAPINO95295 136 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 POP4O95707 220 aaKnown RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 CRYZL1O95825 349 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 TSPAN15O95858 294 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 SERPINC1P01008 464 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 CHRNA1P02708 482 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 CHGBP05060 677 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 C8AP07357 584 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 ENO2P09104 434 aaPredicted RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 ZSCAN22P10073 491 aaPredicted RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 P4HA1P13674 534 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 ATF6P18850 670 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 MUTP22033 750 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 EEF1GP26641 437 aaKnown RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 TNFRSF8P28908 595 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 GNA11P29992 359 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 LRPAP1P30533 357 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 GJA4P35212 333 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 CHKAP35790 457 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 PLCD1P51178 756 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 LINC00310P59036 64 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 IL2P60568 153 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 VBP1P61758 197 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 GNGT1P63211 74 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 NKX3-2P78367 333 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 KIF23Q02241 960 aaPredicted RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 MCL1Q07820 350 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 CDC20Q12834 499 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 R3HDM1Q15032 1099 aaKnown RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 STK38Q15208 465 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 STILQ15468 1287 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 ALX1Q15699 326 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 PTGISQ16647 500 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 RILPL1Q5EBL4 403 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 SPDYAQ5MJ70 313 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 ESRP1Q6NXG1 681 aaKnown RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 DUS1LQ6P1R4 473 aaKnown RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 CEP85Q6P2H3 762 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 CFAP161Q6P656 301 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 KRT27Q7Z3Y8 459 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 ZC3H18Q86VM9 953 aaKnown RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 MMAAQ8IVH4 418 aaKnown RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 PALM2Q8IXS6 379 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 RTKN2Q8IZC4 609 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 ADGRG2Q8IZP9 1017 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 TERB1Q8NA31 727 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 CCDC63Q8NA47 563 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 ATAD1Q8NBU5 361 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 OR2W6PQ8NHA6 318 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 HCAR2Q8TDS4 363 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 HSPH1Q92598 858 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 NELL1Q92832 810 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 TTC17Q96AE7 1141 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 RBM18Q96H35 190 aaKnown RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 LRGUKQ96M69 825 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 OPALINQ96PE5 141 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 BBS4Q96RK4 519 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 ELF4Q99607 663 aaPredicted RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 SLC38A3Q99624 504 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 OLFM1Q99784 485 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 SYT15Q9BQS2 421 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 TRIM15Q9C019 465 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 VPS37BQ9H9H4 285 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 RHBDL2Q9NX52 303 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 AMACRQ9UHK6 382 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 DNAJC12Q9UKB3 198 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 CNOT6Q9ULM6 557 aaKnown RBP5.74□□□□□ -1.49
CD44-236ENST00000533222 SNX7Q9UNH6 387 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 GTF2A1LQ9UNN4 478 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 AGTPBP1Q9UPW5 1226 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 KCTD3Q9Y597 815 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 ABCC12Q96J65 1359 aa5.74□□□□□ -1.49
CD44-236ENST00000533222 KDM5CP41229 1560 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 TIAM1Q13009 1591 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 JCADQ9P266 1359 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 ZNF839A8K0R7 811 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 A8MVJ9 347 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 GOLGA8SH3BPF8 625 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 H7C1D1 291 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 CNOT3O75175 753 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 PDE5AO76074 875 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms