RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 PNKPQ96T60 521 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 AGPAT1Q99943 283 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 ULBP1Q9BZM6 244 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 DCLK3Q9C098 648 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 MIS12Q9H081 205 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 LHX5Q9H2C1 402 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 GRPEL1Q9HAV7 217 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 AIPL1Q9NZN9 384 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 FAM186AA6NE01 2351 aa13.53□□□□□ -0.24
TRAPPC4-212ENST00000533058 MYH10P35580 1976 aa13.52□□□□□ -0.24
TRAPPC4-212ENST00000533058 USP34Q70CQ2 3546 aa13.52□□□□□ -0.24
TRAPPC4-212ENST00000533058 DMDP11532 3685 aa13.52□□□□□ -0.24
TRAPPC4-212ENST00000533058 K7EQS6 105 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 MFAP3LO75121 409 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 STC2O76061 302 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 LSM8O95777 96 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 GRIA2P42262 883 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 TNFRSF4P43489 277 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 DAOAP59103 153 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 MRPS21P82921 87 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 FMO1Q01740 532 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 PDCLQ13371 301 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 BTBD8Q5XKL5 378 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 E4F1Q66K89 784 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 PKN3Q6P5Z2 889 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 TRIM72Q6ZMU5 477 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 IRF2BP2Q7Z5L9 587 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 VPS36Q86VN1 386 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 WDR5BQ86VZ2 330 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 TMEM25Q86YD3 366 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 CNGA4Q8IV77 575 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 PHTF2Q8N3S3 785 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 OR8K1Q8NGG5 319 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 KCNV2Q8TDN2 545 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 USP33Q8TEY7 942 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 CPA5Q8WXQ8 436 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 SYN2Q92777 582 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 GOLGA1Q92805 767 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 PPP1R13BQ96KQ4 1090 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 HAUS4Q9H6D7 363 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 ABCC13Q9NSE7 274 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 C2orf42Q9NWW7 574 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 MARCH2Q9P0N8 246 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 WDR35Q9P2L0 1181 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 NUDT5Q9UKK9 219 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 STRIP2Q9ULQ0 834 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 SLC8A2Q9UPR5 921 aa13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 BZW2Q9Y6E2 419 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-212ENST00000533058 YJEFN3A6XGL0 299 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 E7ENQ6 273 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 SCAMP3O14828 347 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 MDM4O15151 490 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 GABBR2O75899 941 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 FBXO21O94952 628 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 KAT7O95251 611 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 SERPING1P05155 500 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 IRF1P10914 325 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 CHRNB2P17787 502 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 CHKAP35790 457 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 SLC6A11P48066 632 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 EFEMP1Q12805 493 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 BSPRYQ5W0U4 402 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 NUDT18Q6ZVK8 323 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 RSRC2Q7L4I2 434 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 ERICH1Q86X53 443 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 MIB1Q86YT6 1006 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 NDRG1Q92597 394 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 RUBCNQ92622 972 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 ANP32BQ92688 251 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 DEF6Q9H4E7 631 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 DEC1Q9P2X7 70 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 EBF1Q9UH73 591 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 CYTH4Q9UIA0 394 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 HBS1LQ9Y450 684 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 VPS13AQ96RL7 3174 aa13.51□□□□□ -0.25
TRAPPC4-212ENST00000533058 EP300Q09472 2414 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 OTOGLQ3ZCN5 2332 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 TMCO5BA8MYB1 307 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 E5RJQ4 531 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 SART1O43290 800 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 CACNG3O60359 315 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 TULP3O75386 442 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 KLKB1P03952 638 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 APODP05090 189 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 CHRM1P11229 460 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 CDC25BP30305 580 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 PRKCIP41743 596 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 KIR2DL1P43626 348 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 NSFP46459 744 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 NOMO3P69849 1222 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 TBX2Q13207 712 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 TRIP4Q15650 581 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 CLEC16AQ2KHT3 1053 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 OR6B2Q6IFH4 312 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 MSANTD2Q6P1R3 559 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 BEND5Q7L4P6 421 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 ZNF571Q7Z3V5 609 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 C12orf40Q86WS4 652 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms