RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 EDN1P05305 212 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 DLDP09622 509 aaKnown RBP11.69□□□□□ -0.54
NXF1-211ENST00000531709 SLC18A1P54219 525 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 USP4Q13107 963 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 SEPT6Q14141 434 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 TTLL4Q14679 1199 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 CA9Q16790 459 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 PPM1JQ5JR12 505 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 SH2D4BQ5SQS7 431 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 IL31Q6EBC2 164 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 MPP5Q8N3R9 675 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 NMD3Q96D46 503 aaKnown RBP11.69□□□□□ -0.54
NXF1-211ENST00000531709 GTSE1Q9NYZ3 720 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 PCDHGC3Q9UN70 934 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 EFR3BQ9Y2G0 817 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 KPNA7A9QM74 516 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 GSTA2P09210 222 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 LINGO3P0C6S8 592 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 INSRRP14616 1297 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 CPA3P15088 417 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 AVPR1AP37288 418 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 TBL3Q12788 808 aaKnown RBP11.69□□□□□ -0.54
NXF1-211ENST00000531709 CYTH1Q15438 398 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 RALGPS1Q5JS13 557 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 CATSPERGQ6ZRH7 1159 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 CMC1Q7Z7K0 106 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 EBNA1BP2Q99848 306 aaKnown RBP11.69□□□□□ -0.54
NXF1-211ENST00000531709 C20orf96Q9NUD7 363 aaPredicted RBP11.69□□□□□ -0.54
NXF1-211ENST00000531709 LNPEPQ9UIQ6 1025 aa11.69□□□□□ -0.54
NXF1-211ENST00000531709 TRDMT1O14717 391 aaKnown RBP11.68□□□□□ -0.54
NXF1-211ENST00000531709 HBP1O60381 514 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 TPH1P17752 444 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 NEK3P51956 506 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 ITKQ08881 620 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 KIZQ2M2Z5 673 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 STRA8Q7Z7C7 330 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 DNERQ8NFT8 737 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 USP13Q92995 863 aaPredicted RBP11.68□□□□□ -0.54
NXF1-211ENST00000531709 PIWIL1Q96J94 861 aaKnown RBP11.68□□□□□ -0.54
NXF1-211ENST00000531709 SIK2Q9H0K1 926 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 NRDE2Q9H7Z3 1164 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 PIDD1Q9HB75 910 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 PCDH18Q9HCL0 1135 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 SSU72Q9NP77 194 aaKnown RBP11.68□□□□□ -0.54
NXF1-211ENST00000531709 BCAP29Q9UHQ4 241 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 HES2Q9Y543 173 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 GPR25O00155 361 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 SNUPNO95149 360 aaKnown RBP11.68□□□□□ -0.54
NXF1-211ENST00000531709 BPGMP07738 259 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 RARBP10826 455 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 GNAZP19086 355 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 DBN1Q16643 649 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 LRRC23Q53EV4 343 aaPredicted RBP11.68□□□□□ -0.54
NXF1-211ENST00000531709 PPP1R26Q5T8A7 1209 aaPredicted RBP11.68□□□□□ -0.54
NXF1-211ENST00000531709 IYDQ6PHW0 289 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 TREML1Q86YW5 311 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 ADAM32Q8TC27 787 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 GDPD5Q8WTR4 605 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 HTR3CQ8WXA8 447 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 GCNAQ96QF7 691 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 LHX5Q9H2C1 402 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 BTAF1O14981 1849 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 DCAF8L1A6NGE4 600 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 METTL18O95568 372 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 HOXC6P09630 235 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 RAG1P15918 1043 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 TGM2P21980 687 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 SPDYAQ5MJ70 313 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 ACAD11Q709F0 780 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 C10orf107Q8IVU9 208 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 BEST2Q8NFU1 509 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 CMASQ8NFW8 434 aaPredicted RBP11.68□□□□□ -0.54
NXF1-211ENST00000531709 FBXO27Q8NI29 283 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 ZNF483Q8TF39 744 aaPredicted RBP11.68□□□□□ -0.54
NXF1-211ENST00000531709 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 ERAP1Q9NZ08 941 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 DCDC2Q9UHG0 476 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 SLC7A8Q9UHI5 535 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 ARHGAP26Q9UNA1 814 aa11.68□□□□□ -0.54
NXF1-211ENST00000531709 HBS1LQ9Y450 684 aaKnown RBP11.68□□□□□ -0.54
NXF1-211ENST00000531709 LIN7AO14910 233 aaPredicted RBP11.67□□□□□ -0.54
NXF1-211ENST00000531709 PLSCR1O15162 318 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 TGDSO95455 350 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 TUBP50607 506 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 PDCD2Q16342 344 aaPredicted RBP11.67□□□□□ -0.54
NXF1-211ENST00000531709 HSP90AA5PQ58FG0 334 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 PMF1Q6P1K2 205 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 CNBD2Q96M20 576 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 PEBP4Q96S96 227 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 SPATC1LQ9H0A9 340 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 XPNPEP3Q9NQH7 507 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 HUS1O60921 280 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 CCDC130P13994 396 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 GOT1P17174 413 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 SPRP35270 261 aaPredicted RBP11.67□□□□□ -0.54
NXF1-211ENST00000531709 OAZ1P54368 228 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 SLC6A3Q01959 620 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 USP10Q14694 798 aaKnown RBP11.67□□□□□ -0.54
NXF1-211ENST00000531709 ACAP1Q15027 740 aa11.67□□□□□ -0.54
NXF1-211ENST00000531709 CHSY1Q86X52 802 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms