RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 CD248Q9HCU0 757 aa16.25■□□□□ 0.19
CTSB-220ENST00000531089 DNAJC17Q9NVM6 304 aaKnown RBP16.25■□□□□ 0.19
CTSB-220ENST00000531089 LSM7Q9UK45 103 aaKnown RBP16.25■□□□□ 0.19
CTSB-220ENST00000531089 CNTN6Q9UQ52 1028 aa16.25■□□□□ 0.19
CTSB-220ENST00000531089 A0A1W2PQF6 199 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 SETSIPP0DME0 302 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 NTSR1P30989 418 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 TKTL1P51854 596 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 ARHGAP44Q17R89 818 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 MIIPQ5JXC2 388 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 C10orf76Q5T2E6 689 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 PM20D1Q6GTS8 502 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 GRAMD4Q6IC98 578 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 TOGARAM2Q6ZUX3 1019 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 HMGB4Q8WW32 186 aa16.24■□□□□ 0.19
CTSB-220ENST00000531089 CDK5RAP1Q96SZ6 601 aaKnown RBP16.24■□□□□ 0.19
CTSB-220ENST00000531089 TCRBV21S2A2A0A5A6 115 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 PATE3B3GLJ2 98 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 TULP2O00295 520 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 ZBED1O96006 694 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 TPM2P07951 284 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 BRD2P25440 801 aaKnown RBP16.23■□□□□ 0.19
CTSB-220ENST00000531089 USP8P40818 1118 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 WASP42768 502 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 DHPSP49366 369 aaPredicted RBP16.23■□□□□ 0.19
CTSB-220ENST00000531089 ZNF132P52740 706 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 IRX4P78413 519 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 COG7P83436 770 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 GOLGA8FQ08AF8 430 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 GOLGA8DPQ0D2H9 430 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 PKDCCQ504Y2 493 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 EGFLAMQ63HQ2 1017 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 RNF43Q68DV7 783 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 GJB7Q6PEY0 223 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 SLC35F5Q8WV83 523 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 KCTD13Q8WZ19 329 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 NDRG1Q92597 394 aaKnown RBP16.23■□□□□ 0.19
CTSB-220ENST00000531089 TMEM74BQ9NUR3 256 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 PLK2Q9NYY3 685 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 TMEM63CQ9P1W3 806 aa16.23■□□□□ 0.19
CTSB-220ENST00000531089 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.23■□□□□ 0.19
CTSB-220ENST00000531089 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 C4orf47A7E2U8 309 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 CDX4O14627 284 aaPredicted RBP16.22■□□□□ 0.19
CTSB-220ENST00000531089 MED7O43513 233 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 GABRG2P18507 467 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 EFEMP1Q12805 493 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 N4BP2L1Q5TBK1 243 aaPredicted RBP16.22■□□□□ 0.19
CTSB-220ENST00000531089 SMYD5Q6GMV2 418 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 BHLHA9Q7RTU4 235 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 TRMT11Q7Z4G4 463 aaKnown RBP16.22■□□□□ 0.19
CTSB-220ENST00000531089 TMEFF1Q8IYR6 380 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 SIX6OS1Q8N1H7 587 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 PGBD3Q8N328 593 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 ZSWIM1Q9BR11 485 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 ULBP1Q9BZM6 244 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 FANCLQ9NW38 375 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 BCCIPQ9P287 314 aaKnown RBP eCLIP16.22■□□□□ 0.19
CTSB-220ENST00000531089 ZNF510Q9Y2H8 683 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 ADAMTS9Q9P2N4 1935 aa16.22■□□□□ 0.19
CTSB-220ENST00000531089 CHD8Q9HCK8 2581 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 LNP1A1A4G5 178 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 WASH3PC4AMC7 463 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 M0QYV0 167 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 KHNYNO15037 678 aaKnown RBP16.21■□□□□ 0.19
CTSB-220ENST00000531089 MAP3K13O43283 966 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 LETM1O95202 739 aaPredicted RBP16.21■□□□□ 0.19
CTSB-220ENST00000531089 CALCAP01258 141 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 GNA15P30679 374 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 PTGER3P43115 390 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 DGKGP49619 791 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 YWHAGP61981 247 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTSB-220ENST00000531089 APBA1Q02410 837 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 SPDYCQ5MJ68 293 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 FYB2Q5VWT5 728 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 KIAA1211LQ6NV74 962 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 LPCAT2Q7L5N7 544 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 ANKRD20A12PQ8NF67 263 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 ZNF606Q8WXB4 792 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 PIGKQ92643 395 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 BHMTQ93088 406 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 HSFY1Q96LI6 401 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 GABRG3Q99928 467 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 NAT10Q9H0A0 1025 aaKnown RBP16.21■□□□□ 0.19
CTSB-220ENST00000531089 VPS16Q9H269 839 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 CNGB3Q9NQW8 809 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 DNAJC12Q9UKB3 198 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 AGO1Q9UL18 857 aaKnown RBP16.21■□□□□ 0.19
CTSB-220ENST00000531089 EPG5Q9HCE0 2579 aa16.21■□□□□ 0.19
CTSB-220ENST00000531089 THAP12O43422 761 aa16.2■□□□□ 0.18
CTSB-220ENST00000531089 KCNK5O95279 499 aa16.2■□□□□ 0.18
CTSB-220ENST00000531089 PENKP01210 267 aaPredicted RBP16.2■□□□□ 0.18
CTSB-220ENST00000531089 HMBSP08397 361 aa16.2■□□□□ 0.18
CTSB-220ENST00000531089 LCP1P13796 627 aa16.2■□□□□ 0.18
CTSB-220ENST00000531089 HOXB2P14652 356 aa16.2■□□□□ 0.18
CTSB-220ENST00000531089 CDK11BP21127 795 aaKnown RBP16.2■□□□□ 0.18
CTSB-220ENST00000531089 CHKAP35790 457 aa16.2■□□□□ 0.18
CTSB-220ENST00000531089 RGS7P49802 495 aa16.2■□□□□ 0.18
CTSB-220ENST00000531089 MYL5Q02045 173 aa16.2■□□□□ 0.18
CTSB-220ENST00000531089 TYRO3Q06418 890 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms