RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 SYNPO2Q9UMS6 1093 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 SORCS3Q9UPU3 1222 aa14.58□□□□□ -0.08
PCF11-204ENST00000530660 TCRBV9S1A1TA0A576 114 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 TISP43B9A030 160 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 BMP10O95393 424 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 ERBB2P04626 1255 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 SPATA31C1P0DKV0 1188 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 TCF4P15884 667 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 MXI1P50539 228 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 PMS2P3Q13401 168 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 PGS1Q32NB8 556 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 PDPK2PQ6A1A2 396 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 CTAGE3PQ8IX95 158 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 FAM71AQ8IYT1 594 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 CCDC24Q8N4L8 307 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 DHX38Q92620 1227 aaKnown RBP14.57□□□□□ -0.08
PCF11-204ENST00000530660 KLHL32Q96NJ5 620 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 CCDC68Q9H2F9 335 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 PCDH12Q9NPG4 1184 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 CPQQ9Y646 472 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 PHLPP1O60346 1717 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 NFASCO94856 1347 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 CFLARO15519 480 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 AKR1B1P15121 316 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 TCN1P20061 433 aaPredicted RBP14.57□□□□□ -0.08
PCF11-204ENST00000530660 MLLT10P55197 1068 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 TUBA4AP68366 448 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 NDUFA5Q16718 116 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 SHROOM1Q2M3G4 852 aaPredicted RBP14.57□□□□□ -0.08
PCF11-204ENST00000530660 POTEAQ6S8J7 498 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 TMEM102Q8N9M5 508 aaPredicted RBP14.57□□□□□ -0.08
PCF11-204ENST00000530660 PPP1R14CQ8TAE6 165 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 TRPC4APQ8TEL6 797 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 CDRT15Q96T59 188 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 PALMDQ9NP74 551 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 AGPAT3Q9NRZ7 376 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 PNPLA3Q9NST1 481 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 ARHGAP26Q9UNA1 814 aa14.57□□□□□ -0.08
PCF11-204ENST00000530660 COX4I1P13073 169 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 L1CAMP32004 1257 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 ACAD10Q6JQN1 1059 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 ATG14Q6ZNE5 492 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 CLIP4Q8N3C7 705 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 CPT1BQ92523 772 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 SLC29A1Q99808 456 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 FRMD8Q9BZ67 464 aaPredicted RBP14.56□□□□□ -0.08
PCF11-204ENST00000530660 UNKQ9C0B0 810 aaKnown RBP14.56□□□□□ -0.08
PCF11-204ENST00000530660 RNF38Q9H0F5 515 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 MOSPD1Q9UJG1 213 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 GPSM3Q9Y4H4 160 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 GMNNO75496 209 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 SEC24DO94855 1032 aaPredicted RBP14.56□□□□□ -0.08
PCF11-204ENST00000530660 ZBTB7AO95365 584 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 ETFBP38117 255 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 NUDT2P50583 147 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 NFX1Q12986 1120 aaKnown RBP14.56□□□□□ -0.08
PCF11-204ENST00000530660 OXA1LQ15070 435 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 ITIH5Q86UX2 942 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 ZNF786Q8N393 782 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 FAM156AQ8NDB6 213 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 PIWIL2Q8TC59 973 aaKnown RBP14.56□□□□□ -0.08
PCF11-204ENST00000530660 TRUB1Q8WWH5 349 aaKnown RBP14.56□□□□□ -0.08
PCF11-204ENST00000530660 SLC44A1Q8WWI5 657 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 SNX25Q9H3E2 840 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 PNPOQ9NVS9 261 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 PNMA6FA0A0J9YX94 578 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 KCNH1O95259 989 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 GNAO1P09471 354 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 NR4A2P43354 598 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 GDF10P55107 478 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 DNASE1L3Q13609 305 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 LSM12Q3MHD2 195 aaKnown RBP14.56□□□□□ -0.08
PCF11-204ENST00000530660 PPM1NQ8N819 430 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 ACDQ96AP0 544 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 ALPK1Q96QP1 1244 aa14.56□□□□□ -0.08
PCF11-204ENST00000530660 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
PCF11-204ENST00000530660 STX16-NPEPL1H3BU86 382 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 KPNA4O00629 521 aaPredicted RBP14.55□□□□□ -0.08
PCF11-204ENST00000530660 ZBTB39O15060 712 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 DYNC1LI2O43237 492 aaPredicted RBP14.55□□□□□ -0.08
PCF11-204ENST00000530660 ZBTB14O43829 449 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 GRIN3BO60391 1043 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 TMEM63AO94886 807 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 WEE2P0C1S8 567 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 MCF2P10911 925 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 ELK3P41970 407 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 NT5C2P49902 561 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 IDH3AP50213 366 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 RPS8P62241 208 aaKnown RBP14.55□□□□□ -0.08
PCF11-204ENST00000530660 PRR16Q569H4 304 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 WDR45BQ5MNZ6 344 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 DSG4Q86SJ6 1040 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 SLC43A3Q8NBI5 491 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 ZSWIM2Q8NEG5 633 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 OR7G1Q8NGA0 311 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 OTUD5Q96G74 571 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 OLFM1Q99784 485 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 RIC8BQ9NVN3 520 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 IFT52Q9Y366 437 aa14.55□□□□□ -0.08
PCF11-204ENST00000530660 FARP1Q9Y4F1 1045 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms