RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 TBC1D3LB9A6J9 549 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 H3BNC9 293 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 NKX2-8O15522 239 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 ANP32CO43423 234 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 GUCY1B2O75343 617 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 TBC1D3HP0C7X1 549 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 MYCLP12524 364 aaPredicted RBP7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 ACP5P13686 325 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 PPP3CBP16298 524 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 PNPLA4P41247 253 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 RCAN1P53805 252 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 FAM69AQ5T7M9 428 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 SNX30Q5VWJ9 437 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 TBC1D3GQ6DHY5 549 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 TBC1D3CQ6IPX1 549 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 PDXDC1Q6P996 788 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 Q6ZSN1 163 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 TBC1D3Q8IZP1 549 aaPredicted RBP7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 LSM14AQ8ND56 463 aaKnown RBP7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 RSPRY1Q96DX4 576 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 DPCDQ9BVM2 203 aaPredicted RBP7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 USP44Q9H0E7 712 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 PDCL3Q9H2J4 239 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 TMEM74BQ9NUR3 256 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 CAMK2AQ9UQM7 478 aa7.08□□□□□ -1.28
CAPRIN1-208ENST00000530008 PSMD9O00233 223 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 GPR42O15529 346 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 AHCYL1O43865 530 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 PTP4A3O75365 173 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 PEPDP12955 493 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 MMP8P22894 467 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 GRK5P34947 590 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 CNR2P34972 360 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 HNRNPMP52272 730 aaKnown RBP eCLIP7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 FAM189BP81408 668 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 POU5F1Q01860 360 aaKnown RBP7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 TBL3Q12788 808 aaKnown RBP7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 CAMK1Q14012 370 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 PRICKLE4Q2TBC4 344 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 TBC1D10BQ4KMP7 808 aaPredicted RBP7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 UBXN11Q5T124 520 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 C16orf89Q6UX73 402 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 MAVSQ7Z434 540 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 CIR1Q86X95 450 aaPredicted RBP7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 P3H2Q8IVL5 708 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 DIS3L2Q8IYB7 885 aaKnown RBP7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 KCNG4Q8TDN1 519 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 CREB3L4Q8TEY5 395 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 ARRDC3Q96B67 414 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 VPS50Q96JG6 964 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 CCDC68Q9H2F9 335 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 TBC1D29Q9UFV1 150 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 SLC12A4Q9UP95 1085 aa7.07□□□□□ -1.28
CAPRIN1-208ENST00000530008 CCDC187A0A096LP49 1063 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 TNPO2O14787 897 aaKnown RBP7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 SLC16A3O15427 465 aaKnown RBP7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 ORC4O43929 436 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 DHX16O60231 1041 aaKnown RBP7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 SCGB1D1O95968 90 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 CYP3A4P08684 503 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 WEE2P0C1S8 567 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 TNNT1P13805 278 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 ALOX12P18054 663 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 COMTP21964 271 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 HOXD12P35452 270 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 LIPAP38571 399 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 PCP4P48539 62 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 EIF2B5Q13144 721 aaKnown RBP7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 TDGQ13569 410 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 THOC5Q13769 683 aaKnown RBP7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 CBFBQ13951 182 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 EIF4A2Q14240 407 aaKnown RBP7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 CCDC96Q2M329 555 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 ZNF648Q5T619 568 aaPredicted RBP7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 ATF7IPQ6VMQ6 1270 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 CPLX4Q7Z7G2 160 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 LSMEM1Q8N8F7 131 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 B3GALNT2Q8NCR0 500 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 R3HDM4Q96D70 268 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 FAM89AQ96GI7 184 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 ZNF768Q9H5H4 540 aaKnown RBP7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 HAUS2Q9NVX0 235 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 NKIRAS2Q9NYR9 191 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 TBC1D14Q9P2M4 693 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 VPS28Q9UK41 221 aa7.06□□□□□ -1.28
CAPRIN1-208ENST00000530008 GAGE12BA1L429 117 aa7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 GAGE12HA6NDE8 117 aa7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 CCER2I3L3R5 266 aa7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 RNASET2O00584 256 aaKnown RBP7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 TSPAN4O14817 238 aa7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 SPRY2O43597 315 aa7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 TULP3O75386 442 aa7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 NCR1O76036 304 aa7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 PLATP00750 562 aa7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 HSPA1AP0DMV8 641 aaKnown RBP7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 HSPA1BP0DMV9 641 aaKnown RBP7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 ACO1P21399 889 aaKnown RBP7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 EPHA8P29322 1005 aaPredicted RBP7.05□□□□□ -1.28
CAPRIN1-208ENST00000530008 HIBADHP31937 336 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms