RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 RNASE12Q5GAN4 147 aaKnown RBP5.28□□□□□ -1.56
C11orf88-204ENST00000529661 KIAA1614Q5VZ46 1190 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 ABLIM2Q6H8Q1 611 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 TMED8Q6PL24 325 aaPredicted RBP5.28□□□□□ -1.56
C11orf88-204ENST00000529661 MTHFD1LQ6UB35 978 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 ZNF66Q6ZN08 573 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 CHSY1Q86X52 802 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 RAB11FIP4Q86YS3 637 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 SPPL3Q8TCT6 385 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 ABHD5Q8WTS1 349 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 MMS19Q96T76 1030 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 SH2D3AQ9BRG2 576 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 THAP7Q9BT49 309 aaPredicted RBP5.28□□□□□ -1.56
C11orf88-204ENST00000529661 SLC29A3Q9BZD2 475 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 INO80BQ9C086 356 aaPredicted RBP5.28□□□□□ -1.56
C11orf88-204ENST00000529661 TFCP2L1Q9NZI6 479 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 FLRT1Q9NZU1 646 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 KIF17Q9P2E2 1029 aa5.28□□□□□ -1.56
C11orf88-204ENST00000529661 H7C1Q1 480 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 IRAK2O43187 625 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 DNPH1O43598 174 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 VIPP01282 170 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 PYGLP06737 847 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 MYCLP12524 364 aaPredicted RBP5.27□□□□□ -1.57
C11orf88-204ENST00000529661 EPHB2P29323 1055 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 MAPK9P45984 424 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 PSG6Q00889 435 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 EZH2Q15910 746 aaKnown RBP5.27□□□□□ -1.57
C11orf88-204ENST00000529661 FBXO47Q5MNV8 452 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 RASGRP3Q8IV61 690 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 CCDC117Q8IWD4 279 aaPredicted RBP5.27□□□□□ -1.57
C11orf88-204ENST00000529661 PAF1Q8N7H5 531 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 RITA1Q96K30 269 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 ZSCAN31Q96LW9 406 aaPredicted RBP5.27□□□□□ -1.57
C11orf88-204ENST00000529661 ASB2Q96Q27 587 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 HIST1H2AAQ96QV6 131 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 SNX18Q96RF0 628 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 NUDT22Q9BRQ3 303 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 MLXIPQ9HAP2 919 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 SAYSD1Q9NPB0 183 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 PRDM8Q9NQV8 689 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 PDP2Q9P2J9 529 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 LZTS1Q9Y250 596 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 COL15A1P39059 1388 aa5.27□□□□□ -1.57
C11orf88-204ENST00000529661 A0A1B0GVC2 190 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 WDR91A4D1P6 747 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 B9A039 149 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 AGPSO00116 658 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 EXOC5O00471 708 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 FCHO1O14526 889 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 PCDH17O14917 1159 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 GCATO75600 419 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 USP1O94782 785 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 ACTL6BO94805 426 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 SRGAP2BP0DMP2 458 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 CREB1P16220 341 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 CERS1P27544 350 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 NTSR1P30989 418 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 TIRAPP58753 221 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 TIAL1Q01085 375 aaKnown RBP eCLIP5.26□□□□□ -1.57
C11orf88-204ENST00000529661 EFR3AQ14156 821 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 TIGD6Q17RP2 521 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 TRIM60Q495X7 471 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 CEP78Q5JTW2 689 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 KLHL17Q6TDP4 642 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 PTCHD4Q6ZW05 846 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 HERC6Q8IVU3 1022 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 SLC44A2Q8IWA5 706 aaPredicted RBP5.26□□□□□ -1.57
C11orf88-204ENST00000529661 NRSN1Q8IZ57 195 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 CLASRPQ8N2M8 674 aaKnown RBP5.26□□□□□ -1.57
C11orf88-204ENST00000529661 C11orf44Q8N8P7 122 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 MBD3L2Q8NHZ7 208 aaPredicted RBP5.26□□□□□ -1.57
C11orf88-204ENST00000529661 SUN3Q8TAQ9 357 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 SDCCAG3Q96C92 435 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 C5orf34Q96MH7 638 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 ZCWPW1Q9H0M4 648 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 EPS8L2Q9H6S3 715 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 SNX15Q9NRS6 342 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 RRN3Q9NYV6 651 aa5.26□□□□□ -1.57
C11orf88-204ENST00000529661 UBE2Q2LH0YL09 131 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 EIF3FO00303 357 aaPredicted RBP5.25□□□□□ -1.57
C11orf88-204ENST00000529661 NCAM2O15394 837 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 ZSCAN9O15535 394 aaPredicted RBP5.25□□□□□ -1.57
C11orf88-204ENST00000529661 PRR35P0CG20 571 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 GYS1P13807 737 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 YY1P25490 414 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 ADD2P35612 726 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 COPB1P53618 953 aaKnown RBP5.25□□□□□ -1.57
C11orf88-204ENST00000529661 ALDH18A1P54886 795 aaKnown RBP5.25□□□□□ -1.57
C11orf88-204ENST00000529661 AP2B1P63010 937 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 GPS1Q13098 491 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 GRM4Q14833 912 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 CERKLQ49MI3 558 aaPredicted RBP5.25□□□□□ -1.57
C11orf88-204ENST00000529661 MTX3Q5HYI7 312 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 ATPAF1Q5TC12 328 aaPredicted RBP5.25□□□□□ -1.57
C11orf88-204ENST00000529661 BCDIN3DQ7Z5W3 292 aaKnown RBP5.25□□□□□ -1.57
C11orf88-204ENST00000529661 YTHDF3Q7Z739 585 aaKnown RBP5.25□□□□□ -1.57
C11orf88-204ENST00000529661 SFTPA1Q8IWL2 248 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 SCAMP5Q8TAC9 235 aa5.25□□□□□ -1.57
C11orf88-204ENST00000529661 WDYHV1Q96HA8 205 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms