RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 GRID2IPA4D2P6 1211 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 USP27XA6NNY8 438 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 C2CD4DB7Z1M9 353 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 LEFTY2O00292 366 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 LRCH4O75427 683 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 STC2O76061 302 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 MOCS3O95396 460 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 F9P00740 461 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 TCF3P15923 654 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 DESP17661 470 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 VIPR2P41587 438 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 CXCR3P49682 368 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 KCNQ1P51787 676 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 KPNA1P52294 538 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-217ENST00000529133 NAP1L1P55209 391 aaKnown RBP11.91□□□□□ -0.5
CAPN1-217ENST00000529133 COG7P83436 770 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 RING1Q06587 406 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 ACAP1Q15027 740 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 ZNF77Q15935 545 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 ARHGAP29Q52LW3 1261 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 ZC3H12AQ5D1E8 599 aaKnown RBP11.91□□□□□ -0.5
CAPN1-217ENST00000529133 DAB2IPQ5VWQ8 1189 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 C11orf63Q6NUN7 778 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 SND1Q7KZF4 910 aaKnown RBP eCLIP11.91□□□□□ -0.5
CAPN1-217ENST00000529133 FAM131BQ86XD5 332 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 CCAR2Q8N163 923 aaKnown RBP11.91□□□□□ -0.5
CAPN1-217ENST00000529133 CELF5Q8N6W0 485 aaKnown RBP11.91□□□□□ -0.5
CAPN1-217ENST00000529133 SH3RF2Q8TEC5 729 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 ACSF2Q96CM8 615 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-217ENST00000529133 TRIM44Q96DX7 344 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-217ENST00000529133 CALR3Q96L12 384 aaKnown RBP11.91□□□□□ -0.5
CAPN1-217ENST00000529133 GOLPH3Q9H4A6 298 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 TRMT1Q9NXH9 659 aaKnown RBP11.91□□□□□ -0.5
CAPN1-217ENST00000529133 GUCA1BQ9UMX6 200 aa11.91□□□□□ -0.5
CAPN1-217ENST00000529133 ANAPC1Q9H1A4 1944 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 KCNU1A8MYU2 1149 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 GREM1O60565 184 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 RNF8O76064 485 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 APOEP02649 317 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 KLKB1P03952 638 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 TCF4P15884 667 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 MIPP30301 263 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 CCR1P32246 355 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 HTR4Q13639 388 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 PPP2R5DQ14738 602 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 IFI16Q16666 785 aaKnown RBP11.9□□□□□ -0.5
CAPN1-217ENST00000529133 AAK1Q2M2I8 961 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 NUGGCQ68CJ6 796 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 TANGO2Q6ICL3 276 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 PARM1Q6UWI2 310 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 DDX42Q86XP3 938 aaKnown RBP eCLIP11.9□□□□□ -0.5
CAPN1-217ENST00000529133 C17orf53Q8N3J3 647 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-217ENST00000529133 RNF10Q8N5U6 811 aaKnown RBP11.9□□□□□ -0.5
CAPN1-217ENST00000529133 CCDC185Q8N715 623 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 LRRC57Q8N9N7 239 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 TTC16Q8NEE8 873 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 ST13P5Q8NFI4 369 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-217ENST00000529133 KIAA1524Q8TCG1 905 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 RNF34Q969K3 372 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 RPGRIP1Q96KN7 1286 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 LRRC3BQ96PB8 259 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 PEBP4Q96S96 227 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 ZFP14Q9HCL3 533 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 ANLNQ9NQW6 1124 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 TMEM51Q9NW97 253 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.9□□□□□ -0.5
CAPN1-217ENST00000529133 ARHGEF38Q9NXL2 777 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 OBP2AQ9NY56 170 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 NR2E1Q9Y466 385 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 HYOU1Q9Y4L1 999 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 CAPN6Q9Y6Q1 641 aa11.9□□□□□ -0.5
CAPN1-217ENST00000529133 E2F8A0AVK6 867 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 HEPACAM2A8MVW5 462 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 ANHXE9PGG2 379 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 I6L893 689 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-217ENST00000529133 SCAMP3O14828 347 aaKnown RBP11.89□□□□□ -0.51
CAPN1-217ENST00000529133 ECI2O75521 394 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 PALMO75781 387 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 MOCS2O96007 188 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-217ENST00000529133 SLC2A3P11169 496 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 COMTP21964 271 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 CORO1AP31146 461 aaKnown RBP11.89□□□□□ -0.51
CAPN1-217ENST00000529133 PCK1P35558 622 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 TAS2R40P59535 323 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 SLC25A11Q02978 314 aaKnown RBP11.89□□□□□ -0.51
CAPN1-217ENST00000529133 BRMS1LQ5PSV4 323 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 CC2D1AQ6P1N0 951 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-217ENST00000529133 SCYL2Q6P3W7 929 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 VITQ6UXI7 678 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 Q6ZNB5 142 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 CYP4V2Q6ZWL3 525 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-217ENST00000529133 HTR3DQ70Z44 454 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 MTSS1LQ765P7 747 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 UNC45BQ8IWX7 931 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 ZDHHC14Q8IZN3 488 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 FGF14Q92915 247 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 NTAN1Q96AB6 310 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 ELSPBP1Q96BH3 223 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
CAPN1-217ENST00000529133 KXD1Q9BQD3 176 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms