RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 KRT13P13646 458 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 CCNE1P24864 410 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 MPSTP25325 297 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 GRIK1P39086 918 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 PPP1R2P41236 205 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 PRCPP42785 496 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 RAP1GAPP47736 663 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 MXI1P50539 228 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 CDR1P51861 262 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 NDST1P52848 882 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 SLC5A3P53794 718 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 CDH8P55286 799 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 TNK2Q07912 1038 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 ADAM9Q13443 819 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 RUNX3Q13761 415 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 PPP2R5DQ14738 602 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 MTF1Q14872 753 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 TMEM196Q5HYL7 178 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 KRT39Q6A163 491 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 SCARA5Q6ZMJ2 495 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 DMRTC2Q8IXT2 367 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-218ENST00000528877 SMYD4Q8IYR2 804 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-218ENST00000528877 ADSSL1Q8N142 457 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 SPEM1Q8N4L4 309 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 TTC39CQ8N584 583 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 TAS1R2Q8TE23 839 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 EDEM1Q92611 657 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 ATP2A3Q93084 1043 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 ZFYVE19Q96K21 471 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 SLITRK1Q96PX8 696 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 EPC1Q9H2F5 836 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 APOBEC3GQ9HC16 384 aaKnown RBP7.48□□□□□ -1.21
ITGB1-218ENST00000528877 KRT82Q9NSB4 513 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 ZSCAN32Q9NX65 697 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 GTSE1Q9NYZ3 720 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 TRPM5Q9NZQ8 1165 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 HOOK1Q9UJC3 728 aaKnown RBP7.48□□□□□ -1.21
ITGB1-218ENST00000528877 NDRG2Q9UN36 371 aaKnown RBP7.48□□□□□ -1.21
ITGB1-218ENST00000528877 MAPK8IP1Q9UQF2 711 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 COQ4Q9Y3A0 265 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 PCDHA5Q9Y5H7 936 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 KIAA1549LQ6ZVL6 1849 aa7.48□□□□□ -1.21
ITGB1-218ENST00000528877 CEP250Q9BV73 2442 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 OTOL1A6NHN0 477 aaPredicted RBP7.47□□□□□ -1.21
ITGB1-218ENST00000528877 FAM229AH3BQW9 127 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 CETN3O15182 167 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 PMM2O15305 246 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 KINO60870 393 aaKnown RBP7.47□□□□□ -1.21
ITGB1-218ENST00000528877 CILPO75339 1184 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 SMNDC1O75940 238 aaKnown RBP eCLIP7.47□□□□□ -1.213e-8■□□□□ 9.4
ITGB1-218ENST00000528877 PDGFAP04085 211 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 TRIM21P19474 475 aaKnown RBP7.47□□□□□ -1.21
ITGB1-218ENST00000528877 SOX9P48436 509 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 GCLMP48507 274 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 KPNA1P52294 538 aaPredicted RBP7.47□□□□□ -1.21
ITGB1-218ENST00000528877 FKBP3Q00688 224 aaKnown RBP7.47□□□□□ -1.21
ITGB1-218ENST00000528877 AMPD2Q01433 879 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 SPOPLQ6IQ16 392 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 DDX42Q86XP3 938 aaKnown RBP eCLIP7.47□□□□□ -1.21
ITGB1-218ENST00000528877 NUP93Q8N1F7 819 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 CPA6Q8N4T0 437 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 SUMF1Q8NBK3 374 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 FBXL13Q8NEE6 735 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 ZMIZ2Q8NF64 920 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 SH3RF2Q8TEC5 729 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 SMARCE1Q969G3 411 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 HNRNPABQ99729 332 aaKnown RBP7.47□□□□□ -1.21
ITGB1-218ENST00000528877 ARID3AQ99856 593 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 TRPC7Q9HCX4 862 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 GKN1Q9NS71 199 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 R4GN57 208 aa7.47□□□□□ -1.21
ITGB1-218ENST00000528877 ZNF638Q14966 1978 aaKnown RBP7.47□□□□□ -1.21
ITGB1-218ENST00000528877 CHURC1-FNTBB4DL54 471 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 HHLA1C9JL84 531 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 J3QW42 95 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 K7ESF4 209 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 CLDN5O00501 218 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 PSMA7O14818 248 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 NFATC1O95644 943 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 FAM200BP0CF97 657 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 CCDC130P13994 396 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 ARSAP15289 507 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 HDCP19113 662 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 DRD1P21728 446 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 YWHAQP27348 245 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 EIF2DP41214 584 aaKnown RBP7.46□□□□□ -1.22
ITGB1-218ENST00000528877 PMS1P54277 932 aaKnown RBP7.46□□□□□ -1.22
ITGB1-218ENST00000528877 ZXDBP98169 803 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 CSTF1Q05048 431 aaKnown RBP7.46□□□□□ -1.22
ITGB1-218ENST00000528877 GRSF1Q12849 480 aaKnown RBP eCLIP7.46□□□□□ -1.22
ITGB1-218ENST00000528877 TAF10Q12962 218 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 MORC3Q14149 939 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 PON2Q15165 354 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 GAB4Q2WGN9 574 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 FBXO43Q4G163 708 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 TRIM68Q6AZZ1 485 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 FSTL4Q6MZW2 842 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 CC2D1AQ6P1N0 951 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-218ENST00000528877 KLHDC10Q6PID8 442 aa7.46□□□□□ -1.22
ITGB1-218ENST00000528877 Q6ZS52 159 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms