RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 RAD23BP54727 409 aa18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 YWHAGP61981 247 aaKnown RBP eCLIP18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SLC14A1Q13336 389 aa18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ENPP2Q13822 863 aa18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 RGL4Q8IZJ4 473 aa18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 MINDY1Q8N5J2 469 aa18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 KDF1Q8NAX2 398 aaPredicted RBP18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ZDHHC5Q9C0B5 715 aa18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 PRDM16Q9HAZ2 1276 aa18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 DNAAF2Q9NVR5 837 aaKnown RBP18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 NEUROG3Q9Y4Z2 214 aa18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ADAMTS9Q9P2N4 1935 aa18.33■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 TIMM44O43615 452 aa18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SYNCRIPO60506 623 aaKnown RBP18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 KLKB1P03952 638 aa18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 OXTRP30559 389 aa18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 COBLL1Q53SF7 1204 aa18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 PM20D1Q6GTS8 502 aa18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 FAM217AQ8IXS0 508 aa18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 DEFB119Q8N690 84 aa18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SEMA4DQ92854 862 aa18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 USP36Q9P275 1121 aaKnown RBP18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 HESX1Q9UBX0 185 aa18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 AGO1Q9UL18 857 aaKnown RBP18.32■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 GON4LQ3T8J9 2241 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SLC12A8A0AV02 714 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 C1QTNF9BB2RNN3 333 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 XPO1O14980 1071 aaKnown RBP18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ZBED1O96006 694 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 HMBSP08397 361 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 C1QTNF9P0C862 333 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 TKTL1P51854 596 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ARID5AQ03989 594 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 BST2Q10589 180 aaKnown RBP18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 PLEKHG6Q3KR16 790 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 FUT11Q495W5 492 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SGO2Q562F6 1265 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 TCERG1LQ5VWI1 586 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 DENND1CQ8IV53 801 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 CADM4Q8NFZ8 388 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 DDI1Q8WTU0 396 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SCNM1Q9BWG6 230 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ZDHHC9Q9Y397 364 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 COQ4Q9Y3A0 265 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 HBS1LQ9Y450 684 aaKnown RBP18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 CKAP5Q14008 2032 aa18.31■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 MEI4A8MW99 385 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 LATS1O95835 1130 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 TBXAS1P24557 533 aaPredicted RBP18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 IL12RB1P42701 662 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 HARS2P49590 506 aaKnown RBP18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SIM1P81133 766 aaPredicted RBP18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 PDE4CQ08493 712 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 GEN1Q17RS7 908 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ZNF423Q2M1K9 1284 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 MPPE1Q53F39 396 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 WFIKKN2Q8TEU8 576 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 RNF139Q8WU17 664 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 PRCCQ92733 491 aaPredicted RBP18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 GATA6Q92908 595 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 PIWIL1Q96J94 861 aaKnown RBP18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 GOLPH3LQ9H4A5 285 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 LRRC4Q9HBW1 653 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ITM2CQ9NQX7 267 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ELOVL2Q9NXB9 296 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 WSB2Q9NYS7 404 aaPredicted RBP18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 TSPAN16Q9UKR8 245 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 KIAA1257Q9ULG3 409 aa18.3■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 PCNX2A6NKB5 2137 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 A0A1B0GTW7 788 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 WASH3PC4AMC7 463 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SETSIPP0DME0 302 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ACADMP11310 421 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 FKBP3Q00688 224 aaKnown RBP18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 LRRC63Q05C16 580 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 CUL2Q13617 745 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ZNF234Q14588 700 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 TRIP4Q15650 581 aaPredicted RBP18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 GOLGA7BQ2TAP0 167 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 DCAF17Q5H9S7 520 aaPredicted RBP18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ZNF658Q5TYW1 1059 aaPredicted RBP18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SIX6OS1Q8N1H7 587 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SCML4Q8N228 414 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ZNF557Q8N988 423 aaPredicted RBP18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 DNASE2BQ8WZ79 361 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SIPA1Q96FS4 1042 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 TOE1Q96GM8 510 aaKnown RBP18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 IPO9Q96P70 1041 aaKnown RBP18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 GSDMAQ96QA5 445 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ARID3AQ99856 593 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 TMEM121BQ9BXQ6 578 aaPredicted RBP18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 IRX2Q9BZI1 471 aaPredicted RBP18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ULBP1Q9BZM6 244 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 PCED1AQ9H1Q7 454 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SLC6A17Q9H1V8 727 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 ZMIZ1Q9ULJ6 1067 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 CACNA1EQ15878 2313 aa18.29■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 SMC2O95347 1197 aa18.28■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 IGLV3-19P01714 112 aa18.28■□□□□ 0.52
CKLF-CMTM1-202ENST00000527845 VDRP11473 427 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms