RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 PYROXD2Q8N2H3 581 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 ADAM32Q8TC27 787 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 EDEM1Q92611 657 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 FUBP3Q96I24 572 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 RBM15Q96T37 977 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 MAGEB5Q9BZ81 275 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 DDIT4Q9NX09 232 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 ABI2Q9NYB9 513 aaPredicted RBP16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 CEP350Q5VT06 3117 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 TBKBP1A7MCY6 615 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 ADRA1BP35368 520 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 XRCC4Q13426 336 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 TCTN1Q2MV58 587 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 TRIM60Q495X7 471 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 CTXN3Q4LDR2 81 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 BZW1Q7L1Q6 419 aaKnown RBP16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 CTU1Q7Z7A3 348 aaKnown RBP16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 DEFB128Q7Z7B8 93 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 NTAN1Q96AB6 310 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 PWWP2AQ96N64 755 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 CRISPLD2Q9H0B8 497 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 SF3B1O75533 1304 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 BCLAF3A2AJT9 711 aaKnown RBP16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 C5orf60A6NFR6 353 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 SMAPO00193 183 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 KCNN4O15554 427 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 ACSL3O95573 720 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 SLC5A3P53794 718 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 ELAVL2Q12926 359 aaKnown RBP16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 BEND5Q7L4P6 421 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 CDKL3Q8IVW4 592 aaPredicted RBP16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 SCN4BQ8IWT1 228 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 CRIPAKQ8N1N5 446 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 SCAMP5Q8TAC9 235 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 UHMK1Q8TAS1 419 aaKnown RBP16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 RNF139Q8WU17 664 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 TMEM175Q9BSA9 504 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 STMN4Q9H169 189 aaPredicted RBP16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 WBP1LQ9NX94 342 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 FBXW11Q9UKB1 542 aa16.79■□□□□ 0.28
SNRNP35-204ENST00000527158 OR6C75A6NL08 312 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 AMPD1P23109 780 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 CYP2C18P33260 490 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 SLC11A1P49279 550 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 KYNUQ16719 465 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 C6orf118Q5T5N4 469 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 C1orf53Q5VUE5 145 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 ZNF280DQ6N043 979 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 VSTM1Q6UX27 236 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 CENPUQ71F23 418 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 TLCD1Q96CP7 247 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 PGM2Q96G03 612 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 TMEM109Q9BVC6 243 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 WDCPQ9H6R7 721 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 USP29Q9HBJ7 922 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 WDR6Q9NNW5 1121 aaKnown RBP16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 FARP1Q9Y4F1 1045 aaPredicted RBP16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 PCDHB5Q9Y5E4 795 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 H0YHG0 523 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 CREB3O43889 395 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 RBL1P28749 1068 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 MAGEA4P43358 317 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 MNX1P50219 401 aaPredicted RBP16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 GBE1Q04446 702 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 SCAPQ12770 1279 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 IFRD2Q12894 506 aaPredicted RBP16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 C6orf89Q6UWU4 347 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 CPT1BQ92523 772 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 PRCCQ92733 491 aaPredicted RBP16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 GPR62Q9BZJ7 368 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 ROPN1BQ9BZX4 212 aaPredicted RBP16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 RABEP2Q9H5N1 569 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 ROPN1Q9HAT0 212 aaPredicted RBP16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 ABCC13Q9NSE7 274 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 PAK5Q9P286 719 aa16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 NOVA2Q9UNW9 492 aaKnown RBP16.78■□□□□ 0.28
SNRNP35-204ENST00000527158 TLDC2A0PJX2 215 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 EEF2KO00418 725 aaKnown RBP16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 TNFRSF10BO14763 440 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 FGFR3P22607 806 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 YWHAGP61981 247 aaKnown RBP eCLIP16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 BASP1P80723 227 aaKnown RBP16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 MRPL58Q14197 206 aaKnown RBP16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 BTBD8Q5XKL5 378 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 NCBP2-AS2Q69YL0 99 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 FUT10Q6P4F1 479 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 LRRC43Q8N309 656 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 RTP4Q96DX8 246 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 SAYSD1Q9NPB0 183 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 ARHGEF4Q9NR80 690 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 TMPRSS4Q9NRS4 437 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 MARCH5Q9NX47 278 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 NINJ2Q9NZG7 142 aa16.77■□□□□ 0.28
SNRNP35-204ENST00000527158 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.77■□□□□ 0.27
SNRNP35-204ENST00000527158 GOLGA6L7A0A1B0GV03 622 aa16.77■□□□□ 0.27
SNRNP35-204ENST00000527158 RASGRF2O14827 1237 aa16.77■□□□□ 0.27
SNRNP35-204ENST00000527158 MAP3K6O95382 1288 aa16.77■□□□□ 0.27
SNRNP35-204ENST00000527158 GALTP07902 379 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms