RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 DCLK3Q9C098 648 aa13.33□□□□□ -0.27
CLP1-202ENST00000525602 SEMA4GQ9NTN9 838 aa13.33□□□□□ -0.27
CLP1-202ENST00000525602 POLR3BQ9NW08 1133 aaPredicted RBP13.33□□□□□ -0.27
CLP1-202ENST00000525602 MARK1Q9P0L2 795 aa13.33□□□□□ -0.27
CLP1-202ENST00000525602 SFMBT1Q9UHJ3 866 aa13.33□□□□□ -0.27
CLP1-202ENST00000525602 ZNF510Q9Y2H8 683 aa13.33□□□□□ -0.27
CLP1-202ENST00000525602 SIK3Q9Y2K2 1263 aa13.33□□□□□ -0.27
CLP1-202ENST00000525602 HBS1LQ9Y450 684 aaKnown RBP13.33□□□□□ -0.27
CLP1-202ENST00000525602 IGF2RP11717 2491 aa13.33□□□□□ -0.28
CLP1-202ENST00000525602 F8VZ95 297 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 SLC30A4O14863 429 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 EPHB6O15197 1021 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 PAPSS1O43252 624 aaPredicted RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 SART1O43290 800 aaKnown RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 MSI1O43347 362 aaKnown RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 RETP07949 1114 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 ATP1A3P13637 1013 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 PTMSP20962 102 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 CDK11BP21127 795 aaKnown RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 SDHBP21912 280 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 PXNP49023 591 aaPredicted RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 NRLP54845 237 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 BPIFB4P59827 614 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 SYCP1Q15431 976 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 TRIP4Q15650 581 aaPredicted RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 TPGS1Q6ZTW0 290 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 TMEM110Q86TL2 294 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 SCUBE3Q8IX30 993 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 PHTF2Q8N3S3 785 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 WDTC1Q8N5D0 677 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 FAM160A2Q8N612 972 aaPredicted RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 NAT16Q8N8M0 369 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 C1orf131Q8NDD1 294 aaKnown RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 RPLP0P6Q8NHW5 317 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 NETO1Q8TDF5 533 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 PNKPQ96T60 521 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 STK33Q9BYT3 514 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 LHX5Q9H2C1 402 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 ARHGEF4Q9NR80 690 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 FAM207AQ9NSI2 230 aaPredicted RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 TJP2Q9UDY2 1190 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 AGO1Q9UL18 857 aaKnown RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 SYCE3A1L190 88 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 LRRC10BA6NIK2 292 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 NEDD8-MDP1E9PL57 170 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 K7EQS6 105 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 CACNG3O60359 315 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 ATG13O75143 517 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 TULP3O75386 442 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 KAT7O95251 611 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 APODP05090 189 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 FYNP06241 537 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 TYRP14679 529 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 CYP11B1P15538 503 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 KRT9P35527 623 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 SEC13P55735 322 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 POLR2FP61218 127 aaKnown RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 DENND1CQ8IV53 801 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 SFTPA1Q8IWL2 248 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 FAM149B1Q96BN6 582 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 P2RY11Q96G91 374 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 PIWIL1Q96J94 861 aaKnown RBP13.32□□□□□ -0.28
CLP1-202ENST00000525602 CPXM1Q96SM3 734 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 BBS2Q9BXC9 721 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 SMOC1Q9H4F8 434 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 RXFP3Q9NSD7 469 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 WDR35Q9P2L0 1181 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 DAAM1Q9Y4D1 1078 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 CEP83Q9Y592 693 aa13.32□□□□□ -0.28
CLP1-202ENST00000525602 ZFYVE26Q68DK2 2539 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 ANTXRLA6NF34 631 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 SMTNL1A8MU46 457 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
CLP1-202ENST00000525602 NCAM1P13591 858 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 GRIA2P42262 883 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 HARS2P49590 506 aaKnown RBP13.31□□□□□ -0.28
CLP1-202ENST00000525602 ZNF165P49910 485 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 JAM2P57087 298 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 UBXN1Q04323 297 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 SF3A2Q15428 464 aaKnown RBP13.31□□□□□ -0.28
CLP1-202ENST00000525602 ST3GAL2Q16842 350 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 BEND5Q7L4P6 421 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 FAM217AQ8IXS0 508 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 TERB1Q8NA31 727 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 CCDC26Q8TAB7 109 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 DQX1Q8TE96 717 aaKnown RBP13.31□□□□□ -0.28
CLP1-202ENST00000525602 USP33Q8TEY7 942 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 DDX1Q92499 740 aaKnown RBP13.31□□□□□ -0.28
CLP1-202ENST00000525602 BHMTQ93088 406 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 ACDQ96AP0 544 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 PPP1R13BQ96KQ4 1090 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 NOX5Q96PH1 765 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 XPO6Q96QU8 1125 aaKnown RBP13.31□□□□□ -0.28
CLP1-202ENST00000525602 ERGIC2Q96RQ1 377 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 TRIM62Q9BVG3 475 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 NLRC4Q9NPP4 1024 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 DNAJC17Q9NVM6 304 aaKnown RBP13.31□□□□□ -0.28
CLP1-202ENST00000525602 DEC1Q9P2X7 70 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 NAALADL1Q9UQQ1 740 aa13.31□□□□□ -0.28
CLP1-202ENST00000525602 A0A0A0MRY4 1105 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms