RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 SIM1P81133 766 aaPredicted RBP12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 ENPP2Q13822 863 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 EDRF1Q3B7T1 1238 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 CBWD6Q4V339 395 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 CBWD3Q5JTY5 395 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 CBWD5Q5RIA9 395 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 BHLHA9Q7RTU4 235 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 KDF1Q8NAX2 398 aaPredicted RBP12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 PIWIL1Q96J94 861 aaKnown RBP12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 CDK5RAP1Q96SZ6 601 aaKnown RBP12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 ULBP1Q9BZM6 244 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 UBXN6Q9BZV1 441 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 MKRN2Q9H000 416 aaKnown RBP12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 PRDM16Q9HAZ2 1276 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 GDPD2Q9HCC8 539 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 WSB2Q9NYS7 404 aaPredicted RBP12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 MARCH2Q9P0N8 246 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 KLK13Q9UKR3 277 aa12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 TP53BP1Q12888 1972 aaPredicted RBP12.3□□□□□ -0.44
NDUFS3-204ENST00000525378 PTPRBP23467 1997 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 GJB3O75712 270 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 CD6P30203 668 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 TKTL1P51854 596 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 ZNF234Q14588 700 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 PLEKHG6Q3KR16 790 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 TMEM215Q68D42 235 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 RABEPKQ7Z6M1 372 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 METTL3Q86U44 580 aaKnown RBP12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 CPXM2Q8N436 756 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 ANKRD52Q8NB46 1076 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 RBBP8NLQ8NC74 664 aaPredicted RBP12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 SORCS1Q8WY21 1168 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 TOE1Q96GM8 510 aaKnown RBP12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 FAXDC2Q96IV6 333 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 CAMK1GQ96NX5 476 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 DCLK3Q9C098 648 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 ITM2CQ9NQX7 267 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 DNAAF2Q9NVR5 837 aaKnown RBP12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 USP36Q9P275 1121 aaKnown RBP12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 CFAP47Q6ZTR5 3102 aa12.29□□□□□ -0.44
NDUFS3-204ENST00000525378 CETN3O15182 167 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 ZBED1O96006 694 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 SYPP08247 313 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 EPB41P11171 864 aaKnown RBP12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 PRKCHP24723 683 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 PRCPP42785 496 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 COPAP53621 1224 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 PDE4CQ08493 712 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 PNOCQ13519 176 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 STARD3Q14849 445 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 GOLGA7BQ2TAP0 167 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 TCERG1LQ5VWI1 586 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 PM20D1Q6GTS8 502 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 RSRC2Q7L4I2 434 aaKnown RBP12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 ANKS1BQ7Z6G8 1248 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 TMPRSS6Q8IU80 811 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 FAM217AQ8IXS0 508 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 ARHGAP18Q8N392 663 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 TTC39CQ8N584 583 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 DDI1Q8WTU0 396 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 UCMAQ8WVF2 138 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 FOXJ1Q92949 421 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 PLD4Q96BZ4 506 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 GPR174Q9BXC1 333 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 ELOVL2Q9NXB9 296 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 SFMBT1Q9UHJ3 866 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 TSPAN16Q9UKR8 245 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 STRIP2Q9ULQ0 834 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 NEUROG3Q9Y4Z2 214 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
NDUFS3-204ENST00000525378 XPO1O14980 1071 aaKnown RBP12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 SH3BP5O60239 455 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 TSPAN3O60637 253 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 CYBBP04839 570 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 NCAM1P13591 858 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 HLA-EP13747 358 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 HOXD9P28356 352 aaPredicted RBP12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 TPMTP51580 245 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 ZNF132P52740 706 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 PMS1P54277 932 aaKnown RBP12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 ADIGQ0VDE8 80 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 GRIK2Q13002 908 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 TRIP4Q15650 581 aaPredicted RBP12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 DCAF17Q5H9S7 520 aaPredicted RBP12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 WDR45BQ5MNZ6 344 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 SYCP2LQ5T4T6 812 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 CACUL1Q86Y37 369 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 FMNL3Q8IVF7 1028 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 CHCHD4Q8N4Q1 142 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 UBA3Q8TBC4 463 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 DNASE2BQ8WZ79 361 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 SIPA1Q96FS4 1042 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 CIPCQ9C0C6 399 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 SCAND2PQ9GZW5 306 aaPredicted RBP12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 FAM124BQ9H5Z6 455 aaPredicted RBP12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 SUSD2Q9UGT4 822 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 COQ4Q9Y3A0 265 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 MSRB2Q9Y3D2 182 aa12.27□□□□□ -0.45
NDUFS3-204ENST00000525378 NYNRINQ9P2P1 1898 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms